| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 4261.77 | HC |
| SRR3140955 | leaf | "45C, 12h" | 181.71 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 6279.51 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 3403.76 | HC |
| SRR8258050 | leaf_sheath | R_bph | 4397.75 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 54953.38 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4660.14 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 5275.89 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 5933.05 | HC |
| SRR10690152 | leaf | IRBB5_0h | 33042.12 | HC |
| SRR6810106 | panicle | panicle | 7287.10 | HC |
| SRR7058097 | leaf | rice_mock | 7537.43 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 48.71 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 851.01 | HC |
| SRR7058098 | leaf | rice_RSV | 6982.66 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5279.42 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 3061.51 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 2293.96 | HC |
| SRR2154077 | seedling | KDM105_seedling | 2634.80 | HC |
| SRR2154074 | seed | Nipponbare_seed | 2460.17 | HC |
| SRR10690151 | leaf | IRBB5_0h | 24288.83 | HC |
| SRR2154072 | seed | Rathuwee_seed | 1415.94 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 2787.55 | HC |
| SRR2154070 | seed | Guangluai4_seed | 2879.65 | HC |
| SRR2154071 | seed | KDM105_seed | 842.14 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 341.93 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 6272.30 | HC |
| SRR1061625 | panicle | Heat Stress | 16224.05 | HC |
| SRR1061624 | panicle | Normal | 43087.86 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 18893.26 | HC |
| SRR1061622 | flag_leaf | Normal | 78239.31 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 89154.85 | HC |
| SRR1061620 | flag_leaf | Normal | 63185.80 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 14131.98 | HC |
| SRR10704058 | leaf | Glyphosate | 9370.88 | HC |
| SRR447128 | root | As(III) 20 uM | 1556.71 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 16279.54 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 8806.88 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 12716.84 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 1905.93 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 1339.16 | HC |
| SRR1013787 | panicle | PA64s_PA | 16291.62 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 2124.62 | HC |
| SRR504363 | leaf | 93-11 X NPB | 8302.06 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 357.13 | HC |
| SRR1013789 | panicle | 93-11_PA | 6029.91 | HC |
| SRR1013788 | panicle | LYP9_PA | 7724.80 | HC |
| SRR9070101 | shoot_base | WT_base | 717.61 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 6157.03 | HC |
| SRR6810105 | panicle | panicle | 6549.67 | HC |
| SRR089619 | panicle | control | 708.99 | HC |
| SRR447135 | shoot | As(III) 20 uM | 133.85 | HC |
| SRR447134 | shoot | As(III) 80 uM | 521.02 | HC |
| SRR447133 | shoot | As(III) 20 uM | 378.20 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 801.17 | HC |
| SRR447131 | root | As(III) 80 uM | 89.83 | HC |
| SRR447130 | root | As(III) 20 uM | 3422.15 | HC |
| SRR1849765 | leaf | Control 30min | 9875.63 | HC |
| SRR1849767 | leaf | Control 30min | 13056.14 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1938.55 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 12390.52 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1291.37 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 49402.28 | HC |
| SRR6498701 | leaf | "WT, Control" | 40422.92 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 77323.48 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1776.74 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 12144.79 | HC |
| SRR3203907 | leaf | WT | 14344.33 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 31700.58 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 3167.43 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1634.38 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 975.66 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 2237.75 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 387.01 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1089.93 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1648.28 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1331.25 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1537.15 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2657.88 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1010.10 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 15175.05 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17699.55 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 21596.71 | HC |
| SRR447129 | root | As(III) 80 uM | 2148.46 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 4184.56 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 10606.87 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 12478.32 | HC |
| SRR1849773 | leaf | Control 120min | 10170.84 | HC |
| SRR1849772 | leaf | Control 120min | 13144.33 | HC |
| SRR1849771 | leaf | Control 120min | 12389.58 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 10704.44 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 6128.40 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2670.90 | HC |
| SRR3130370 | leaf | control 8 hour | 7480.36 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 9892.00 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 3212.07 | HC |
| SRR7058096 | leaf | rice_mock | 8623.29 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 1642.03 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 1943.73 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 2979.21 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 18279.20 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 7275.77 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 50681.12 | HC |
| SRR6365689 | seedling | Wild type | 2529.28 | HC |
| SRR447136 | shoot | As(III) 80 uM | 809.74 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6824.54 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 73014.86 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 15819.10 | HC |
| SRR10704060 | leaf | Glyphosate | 4741.59 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 55335.41 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 6982.66 | HC |
| SRR2154075 | seed | Taipei309_seed | 1633.85 | HC |
| SRR3140952 | leaf | "45C, 0h" | 716.07 | HC |
| SRR976171 | lamina_joint | wild type | 3546.77 | HC |
| SRR4098208 | root | No treatment | 2325.24 | HC |
| SRR089774 | panicle | wild-type | 33.21 | HC |
| SRR089772 | panicle | wild-type | 29.91 | HC |
| SRR4098209 | leaf | No treatment | 503.07 | HC |
| SRR3130369 | leaf | control 8 hour | 6380.56 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 5779.42 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 6112.30 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 14042.14 | HC |
| SRR9070100 | shoot_base | WT_base | 768.05 | HC |
| SRR4098205 | seedling | Heat (50C) | 352.45 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 32221.45 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 7397.09 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12574.44 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 12881.37 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 11712.26 | HC |
| SRR3130365 | leaf | control 0 hour | 13049.92 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 7621.33 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 4754.01 | HC |
| SRR3130366 | leaf | control 0 hour | 6468.21 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 4195.65 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 4262.31 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 2705.13 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 2299.38 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 1154.64 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 1163.00 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 3052.77 | HC |
| SRR2862364 | leaf | mock leaf cells | 1090.47 | HC |
| SRR2862365 | leaf | mock leaf cells | 1075.39 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 3536.20 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 981.68 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1079.37 | HC |
| SRR2862363 | leaf | mock leaf cells | 2848.18 | HC |
| SRR8649147 | panicle | panicle tissue | 75715.48 | HC |
| SRR4098207 | panicle | No treatment | 410.34 | HC |
| SRR10704055 | leaf | CK | 4382.08 | HC |
| SRR10704057 | leaf | CK | 13911.93 | HC |
| SRR10704056 | leaf | CK | 4668.54 | HC |
| SRR10704059 | leaf | Glyphosate | 2169.17 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 64432.28 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5817.75 | HC |
| SRR9070102 | shoot_base | WT_base | 534.66 | HC |
| SRR6498699 | leaf | "WT, Control" | 37679.16 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 2157.74 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 3259.29 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13451.51 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 18392.33 | HC |
| SRR10690144 | leaf | IR24_0h | 8127.63 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 6066.53 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 12695.39 | HC |
| SRR10690143 | leaf | IR24_0h | 22377.26 | HC |
| SRR10690142 | leaf | IR24_0h | 22712.18 | HC |
| SRR2646852 | panicle | FP | 46650.06 | HC |
| SRR2646853 | panicle | FP | 21965.94 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 7848.78 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 12797.79 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 11561.77 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 12870.35 | HC |
| SRR2646854 | panicle | SP | 24428.66 | HC |
| SRR2646855 | panicle | SP | 16427.30 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 8476.75 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 5777.49 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 14895.45 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 2335.39 | HC |
| SRR4098203 | seedling | No treatment | 220.05 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 7391.52 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 5577.44 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 6365.40 | HC |
| SRR6365690 | seedling | Wild type | 2198.58 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 1868.66 | HC |
| SRR6365692 | panicle | Wild type | 2768.28 | HC |
| SRR6365693 | panicle | Wild type | 17124.62 | HC |
| SRR6365694 | panicle | Wild type | 16963.61 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1262.05 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 7028.27 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 13699.67 | HC |
| SRR6810101 | seedling | seedling | 28550.55 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3250.19 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3759.77 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 5510.56 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 5342.90 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 3084.39 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 6246.72 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 2405.98 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 353.44 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1298.14 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 14194.92 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 6073.44 | HC |
| SRR1849784 | root | Control 120min | 6129.10 | HC |
| SRR6365691 | panicle | Wild type | 3050.65 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 2069.54 | HC |
| SRR10690153 | leaf | IRBB5_0h | 13223.55 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 908.50 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 3418.69 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 1518.98 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 18475.42 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 2212.07 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 908.52 | HC |
| SRR3110556 | shoot | shoot control | 7669.42 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 7493.21 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4884.51 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 9340.99 | HC |
| SRR1061616 | panicle | Normal | 20315.52 | HC |
| SRR1061617 | panicle | Heat Stress | 41725.20 | HC |
| SRR1061614 | panicle | Normal | 25642.46 | HC |
| SRR1061615 | panicle | Heat Stress | 52314.54 | HC |
| SRR1061612 | panicle | Normal | 19858.54 | HC |
| SRR1061613 | panicle | Heat Stress | 22077.04 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 16654.65 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 11874.66 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2761.57 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 29381.97 | HC |
| SRR1061618 | flag_leaf | Normal | 31744.88 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 22544.32 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 216.83 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 548.31 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 7062.17 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 2344.74 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 3078.36 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2828.70 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 2929.62 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 41193.70 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 7512.24 | HC |
| SRR3140954 | leaf | "45C, 12h" | 1404.53 | HC |
| SRR089621 | panicle | cold | 1307.35 | HC |
| SRR089620 | panicle | drought | 746.10 | HC |
| SRR3140957 | leaf | "45C, 24h" | 2792.17 | HC |
| SRR089622 | panicle | salt | 391.17 | HC |
| SRR504360 | leaf | Nipponbare | 3986.76 | HC |
| SRR504361 | leaf | Nov-93 | 7229.83 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 35629.50 | HC |
| SRR2544786 | embryo | dry seed | 11822.93 | HC |
| SRR4098172 | seedling | Cold (4C) | 660.53 | HC |
| SRR3140956 | leaf | "45C, 24h" | 2796.99 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 10490.57 | HC |
| SRR3140953 | leaf | "45C, 0h" | 1030.75 | HC |
| SRR6810102 | seedling | seedling | 35315.47 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 3463.66 | HC |
| SRR10956502 | panicle | WT | 17233.86 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 1248.65 | HC |
| SRR10956501 | panicle | WT | 17806.85 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3748.81 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 3047.15 | HC |
| SRR8258048 | leaf_sheath | R_bph | 4426.35 | HC |
| SRR1740023 | seedling | IR64-Control | 2242.66 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 2090.16 | HC |
| SRR1740025 | seedling | PK-Control | 1683.84 | HC |
| SRR1740024 | seedling | N22-Control | 1607.17 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 57470.36 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 56534.94 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12009.03 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 21031.74 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 4208.21 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 11849.71 | HC |
| SRR1654490 | leaf | wild type | 17088.15 | HC |
| SRR3110557 | shoot | shoot treated | 6452.31 | HC |
| SRR5940086 | panicle | Wild type | 38960.08 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 2025.98 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 2579.47 | HC |
| SRR8258051 | leaf_sheath | R_bph | 4186.87 | HC |
| SRR504362 | leaf | NPB X 93-11 | 4035.77 | HC |