| SRR1849776 | leaf | Margaporthe oryzae 120min | 304.34 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 761.29 | HC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 29835.07 | HC |
| SRR3140955 | leaf | "45C, 12h" | 105.76 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 59012.02 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 427.18 | HC |
| SRR8258050 | leaf_sheath | R_bph | 51413.01 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 1046.30 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 44787.58 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 43396.61 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 43456.76 | HC |
| SRR10690152 | leaf | IRBB5_0h | 12428.51 | HC |
| SRR6810106 | panicle | panicle | 186.38 | HC |
| SRR7058097 | leaf | rice_mock | 8478.78 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1458.13 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 2127.89 | HC |
| SRR7058098 | leaf | rice_RSV | 7941.02 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 15433.27 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 551.49 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 28.88 | HC |
| SRR2154077 | seedling | KDM105_seedling | 27.74 | HC |
| SRR2154074 | seed | Nipponbare_seed | 31.25 | HC |
| SRR10690151 | leaf | IRBB5_0h | 7739.15 | HC |
| SRR2154072 | seed | Rathuwee_seed | 81.26 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 11.94 | HC |
| SRR2154070 | seed | Guangluai4_seed | 60.73 | HC |
| SRR2154071 | seed | KDM105_seed | 11.19 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 3318.89 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 18346.85 | HC |
| SRR1061625 | panicle | Heat Stress | 715.09 | HC |
| SRR1061624 | panicle | Normal | 865.62 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 4802.30 | HC |
| SRR1061622 | flag_leaf | Normal | 3345.61 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 1538.30 | HC |
| SRR1061620 | flag_leaf | Normal | 1426.11 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 18232.85 | HC |
| SRR10704058 | leaf | Glyphosate | 796.14 | HC |
| SRR447128 | root | As(III) 20 uM | 141.20 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 16754.51 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 224.91 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 349.88 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 117.01 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 124.04 | HC |
| SRR1013787 | panicle | PA64s_PA | 239.65 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 134.91 | HC |
| SRR504363 | leaf | 93-11 X NPB | 4393.11 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 2218.90 | HC |
| SRR1013789 | panicle | 93-11_PA | 48.32 | HC |
| SRR1013788 | panicle | LYP9_PA | 79.95 | HC |
| SRR9070101 | shoot_base | WT_base | 345.48 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 68.75 | HC |
| SRR6810105 | panicle | panicle | 172.81 | HC |
| SRR089619 | panicle | control | 4400.85 | HC |
| SRR447135 | shoot | As(III) 20 uM | 919.22 | HC |
| SRR447134 | shoot | As(III) 80 uM | 493.69 | HC |
| SRR447133 | shoot | As(III) 20 uM | 393.51 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 1133.52 | HC |
| SRR447131 | root | As(III) 80 uM | 515.59 | HC |
| SRR447130 | root | As(III) 20 uM | 542.93 | HC |
| SRR1849765 | leaf | Control 30min | 1195.86 | HC |
| SRR1849767 | leaf | Control 30min | 1211.40 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 231.02 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 1203.70 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 122.53 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 3027.91 | HC |
| SRR6498701 | leaf | "WT, Control" | 1813.69 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 575.04 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 13046.52 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 19485.91 | HC |
| SRR3203907 | leaf | WT | 147.30 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1547.26 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 5503.30 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 5493.44 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 2373.11 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 4617.38 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1932.84 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 2861.44 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 5481.79 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 3706.85 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 4345.81 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 7079.79 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 18593.30 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 509.98 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 635.69 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 604.25 | HC |
| SRR447129 | root | As(III) 80 uM | 123.62 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 1210.18 | HC |
| SRR1849773 | leaf | Control 120min | 1164.67 | HC |
| SRR1849772 | leaf | Control 120min | 694.31 | HC |
| SRR1849771 | leaf | Control 120min | 1060.73 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1398.04 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 689.57 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 788.79 | HC |
| SRR3130370 | leaf | control 8 hour | 674.43 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 533.89 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 488.14 | HC |
| SRR7058096 | leaf | rice_mock | 9453.65 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 65.07 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 100.26 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 61.42 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 3690.96 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 250.90 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 1153.22 | HC |
| SRR6365689 | seedling | Wild type | 363.26 | HC |
| SRR447136 | shoot | As(III) 80 uM | 344.42 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 248.03 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 1718.84 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 15668.13 | HC |
| SRR10704060 | leaf | Glyphosate | 874.04 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 1226.86 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 359.08 | HC |
| SRR2154075 | seed | Taipei309_seed | 15.69 | HC |
| SRR3140952 | leaf | "45C, 0h" | 313.38 | HC |
| SRR976171 | lamina_joint | wild type | 10385.82 | HC |
| SRR4098208 | root | No treatment | 3490.38 | HC |
| SRR089774 | panicle | wild-type | 55.32 | HC |
| SRR089772 | panicle | wild-type | 27.48 | HC |
| SRR4098209 | leaf | No treatment | 5411.65 | HC |
| SRR3130369 | leaf | control 8 hour | 964.63 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 279.30 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 330.40 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 511.85 | HC |
| SRR9070100 | shoot_base | WT_base | 385.56 | HC |
| SRR4098205 | seedling | Heat (50C) | 4925.77 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 1903.40 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 267.85 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 284.32 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 405.44 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 290.05 | HC |
| SRR3130365 | leaf | control 0 hour | 963.90 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 184.92 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 311.25 | HC |
| SRR3130366 | leaf | control 0 hour | 582.97 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 49.82 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 51.82 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 44.58 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 333.16 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 566.02 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 557.13 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 143.35 | HC |
| SRR2862364 | leaf | mock leaf cells | 189.74 | HC |
| SRR2862365 | leaf | mock leaf cells | 164.55 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 1368.48 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 472.55 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 6873.46 | HC |
| SRR2862363 | leaf | mock leaf cells | 1226.11 | HC |
| SRR8649147 | panicle | panicle tissue | 1144.61 | HC |
| SRR4098207 | panicle | No treatment | 2709.95 | HC |
| SRR10704055 | leaf | CK | 301.11 | HC |
| SRR10704057 | leaf | CK | 750.72 | HC |
| SRR10704056 | leaf | CK | 239.97 | HC |
| SRR10704059 | leaf | Glyphosate | 142.34 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 3033.50 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 154.26 | HC |
| SRR9070102 | shoot_base | WT_base | 296.17 | HC |
| SRR6498699 | leaf | "WT, Control" | 2535.57 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 64.09 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 55.93 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 547.36 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 16074.67 | HC |
| SRR10690144 | leaf | IR24_0h | 18320.10 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 16955.68 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 12647.03 | HC |
| SRR10690143 | leaf | IR24_0h | 8893.00 | HC |
| SRR10690142 | leaf | IR24_0h | 11829.96 | HC |
| SRR2646852 | panicle | FP | 1635.79 | HC |
| SRR2646853 | panicle | FP | 1881.48 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 452.28 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 281.93 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 14429.64 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 17609.86 | HC |
| SRR2646854 | panicle | SP | 1967.39 | HC |
| SRR2646855 | panicle | SP | 1153.59 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 7078.71 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 291.46 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 1771.14 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 577.17 | HC |
| SRR4098203 | seedling | No treatment | 3682.00 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 985.72 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 548.74 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 376.10 | HC |
| SRR6365690 | seedling | Wild type | 317.24 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 607.38 | HC |
| SRR6365692 | panicle | Wild type | 890.83 | HC |
| SRR6365693 | panicle | Wild type | 903.43 | HC |
| SRR6365694 | panicle | Wild type | 865.32 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 159.88 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 16371.85 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 10256.43 | HC |
| SRR6810101 | seedling | seedling | 686.55 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 34560.35 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 35779.91 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 255.92 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 424.18 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 29801.20 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 62432.33 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 290.57 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 2304.67 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 3859.05 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 17587.13 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 19673.53 | HC |
| SRR1849784 | root | Control 120min | 152.20 | HC |
| SRR6365691 | panicle | Wild type | 963.44 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 5526.32 | HC |
| SRR10690153 | leaf | IRBB5_0h | 54543.85 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 3637.51 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 6076.24 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 3781.62 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 15828.63 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 5248.94 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 4066.53 | HC |
| SRR3110556 | shoot | shoot control | 70913.28 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 13279.32 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 196.26 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 22084.09 | HC |
| SRR1061616 | panicle | Normal | 416.80 | HC |
| SRR1061617 | panicle | Heat Stress | 1096.17 | HC |
| SRR1061614 | panicle | Normal | 567.24 | HC |
| SRR1061615 | panicle | Heat Stress | 1424.94 | HC |
| SRR1061612 | panicle | Normal | 1836.67 | HC |
| SRR1061613 | panicle | Heat Stress | 1676.12 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 7988.80 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 466.88 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 5750.43 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 1851.20 | HC |
| SRR1061618 | flag_leaf | Normal | 1945.02 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 1218.42 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 6460.50 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 9589.77 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 501.78 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 433.64 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 31849.53 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 29344.37 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 46742.93 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 5662.05 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 526.20 | HC |
| SRR3140954 | leaf | "45C, 12h" | 511.61 | HC |
| SRR089621 | panicle | cold | 7817.68 | HC |
| SRR089620 | panicle | drought | 6139.11 | HC |
| SRR3140957 | leaf | "45C, 24h" | 205.79 | HC |
| SRR089622 | panicle | salt | 4762.75 | HC |
| SRR504360 | leaf | Nipponbare | 2392.17 | HC |
| SRR504361 | leaf | Nov-93 | 2603.33 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 4493.75 | HC |
| SRR2544786 | embryo | dry seed | 1860.52 | HC |
| SRR4098172 | seedling | Cold (4C) | 2145.40 | HC |
| SRR3140956 | leaf | "45C, 24h" | 172.81 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 310.20 | HC |
| SRR3140953 | leaf | "45C, 0h" | 202.50 | HC |
| SRR6810102 | seedling | seedling | 779.39 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 37044.34 | HC |
| SRR10956502 | panicle | WT | 1019.59 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 287.65 | HC |
| SRR10956501 | panicle | WT | 865.17 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 32970.59 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 6881.47 | HC |
| SRR8258048 | leaf_sheath | R_bph | 42082.97 | HC |
| SRR1740023 | seedling | IR64-Control | 275.41 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 20.04 | HC |
| SRR1740025 | seedling | PK-Control | 218.42 | HC |
| SRR1740024 | seedling | N22-Control | 184.84 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 1011.50 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 857.49 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 466.73 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 406.24 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 35096.38 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 2488.77 | HC |
| SRR1654490 | leaf | wild type | 99.90 | HC |
| SRR3110557 | shoot | shoot treated | 51553.48 | HC |
| SRR5940086 | panicle | Wild type | 751.46 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 8836.24 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 6898.20 | HC |
| SRR8258051 | leaf_sheath | R_bph | 52301.30 | HC |
| SRR504362 | leaf | NPB X 93-11 | 1407.11 | HC |