| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 1004.37 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 2049.45 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 49.50 | HC |
| SRR8258050 | leaf_sheath | R_bph | 2353.23 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 90.27 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 2610.29 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 1436.28 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 1492.26 | HC |
| SRR10690152 | leaf | IRBB5_0h | 193.75 | HC |
| SRR6810106 | panicle | panicle | 75.20 | HC |
| SRR7058097 | leaf | rice_mock | 404.05 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 98.14 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 128.80 | HC |
| SRR7058098 | leaf | rice_RSV | 413.80 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 66.37 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 98.28 | HC |
| SRR10690151 | leaf | IRBB5_0h | 146.35 | HC |
| SRR2154070 | seed | Guangluai4_seed | 6.01 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 20.01 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 99.07 | HC |
| SRR1061625 | panicle | Heat Stress | 10.26 | HC |
| SRR1061624 | panicle | Normal | 44.38 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 100.38 | HC |
| SRR1061622 | flag_leaf | Normal | 415.21 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 91.94 | HC |
| SRR1061620 | flag_leaf | Normal | 180.70 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 108.53 | HC |
| SRR10704058 | leaf | Glyphosate | 70.30 | HC |
| SRR447128 | root | As(III) 20 uM | 26.19 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 113.61 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 35.04 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 215.03 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 108.14 | HC |
| SRR9070101 | shoot_base | WT_base | 28.60 | HC |
| SRR6810105 | panicle | panicle | 62.81 | HC |
| SRR089619 | panicle | control | 17.83 | HC |
| SRR447135 | shoot | As(III) 20 uM | 31.56 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 44.94 | HC |
| SRR447131 | root | As(III) 80 uM | 43.91 | HC |
| SRR447130 | root | As(III) 20 uM | 91.90 | HC |
| SRR1849767 | leaf | Control 30min | 45.79 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 148.22 | HC |
| SRR6498701 | leaf | "WT, Control" | 47.27 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 40.70 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 2589.14 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 60.09 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 58.48 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 39.26 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 50.01 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 126.23 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 23.33 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 43.07 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 58.28 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 66.96 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 65.76 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 139.88 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 103.37 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 363.14 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 656.90 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 621.02 | HC |
| SRR447129 | root | As(III) 80 uM | 8.62 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 49.04 | HC |
| SRR7058096 | leaf | rice_mock | 236.19 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 3.98 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 6.61 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 898.82 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 53.84 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 53.30 | HC |
| SRR6365689 | seedling | Wild type | 42.39 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 159.08 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 118.40 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 2370.87 | HC |
| SRR10704060 | leaf | Glyphosate | 48.87 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 76.80 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 35.04 | HC |
| SRR3140952 | leaf | "45C, 0h" | 22.50 | HC |
| SRR976171 | lamina_joint | wild type | 236.54 | HC |
| SRR4098208 | root | No treatment | 175.29 | HC |
| SRR4098209 | leaf | No treatment | 92.54 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 94.42 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 497.63 | HC |
| SRR9070100 | shoot_base | WT_base | 38.28 | HC |
| SRR4098205 | seedling | Heat (50C) | 23.00 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 359.11 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 92.75 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 185.34 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 300.33 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 91.81 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 43.08 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 4.79 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 3.42 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 3.94 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 5.70 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 20.35 | HC |
| SRR8649147 | panicle | panicle tissue | 455.89 | HC |
| SRR4098207 | panicle | No treatment | 48.49 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 362.08 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 38.57 | HC |
| SRR9070102 | shoot_base | WT_base | 20.65 | HC |
| SRR6498699 | leaf | "WT, Control" | 113.48 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 621.50 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 58.46 | HC |
| SRR10690144 | leaf | IR24_0h | 194.75 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 80.41 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 80.66 | HC |
| SRR10690143 | leaf | IR24_0h | 117.89 | HC |
| SRR10690142 | leaf | IR24_0h | 140.72 | HC |
| SRR2646852 | panicle | FP | 876.18 | HC |
| SRR2646853 | panicle | FP | 799.72 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 92.67 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 182.40 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 65.37 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 79.85 | HC |
| SRR2646854 | panicle | SP | 1017.34 | HC |
| SRR2646855 | panicle | SP | 436.43 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 1744.29 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 32.93 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 122.83 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 28.48 | HC |
| SRR4098203 | seedling | No treatment | 53.85 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 103.03 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 25.38 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 45.33 | HC |
| SRR6365690 | seedling | Wild type | 41.54 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 95.42 | HC |
| SRR6365692 | panicle | Wild type | 81.58 | HC |
| SRR6365693 | panicle | Wild type | 74.11 | HC |
| SRR6365694 | panicle | Wild type | 72.71 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1998.47 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 185.06 | HC |
| SRR6810101 | seedling | seedling | 204.94 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1124.80 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 1145.17 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 52.01 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 11.42 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 1701.32 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 2389.35 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 59.24 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 19.29 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 51.69 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 164.14 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 203.89 | HC |
| SRR6365691 | panicle | Wild type | 83.66 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 720.38 | HC |
| SRR10690153 | leaf | IRBB5_0h | 819.74 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 134.45 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 215.54 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 93.19 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 141.74 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 91.11 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 68.34 | HC |
| SRR3110556 | shoot | shoot control | 386.68 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 148.25 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 56.98 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 308.86 | HC |
| SRR1061616 | panicle | Normal | 7.34 | HC |
| SRR1061617 | panicle | Heat Stress | 28.98 | HC |
| SRR1061614 | panicle | Normal | 24.51 | HC |
| SRR1061615 | panicle | Heat Stress | 36.34 | HC |
| SRR1061612 | panicle | Normal | 13.33 | HC |
| SRR1061613 | panicle | Heat Stress | 29.89 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 210.54 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 366.21 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 50.95 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 345.43 | HC |
| SRR1061618 | flag_leaf | Normal | 116.76 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 76.94 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 29.85 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 28.64 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 335.66 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 37.83 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 1326.80 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 1194.27 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 1709.18 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 2058.93 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 432.39 | HC |
| SRR3140954 | leaf | "45C, 12h" | 19.22 | HC |
| SRR089621 | panicle | cold | 39.13 | HC |
| SRR089620 | panicle | drought | 19.53 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 1596.99 | HC |
| SRR2544786 | embryo | dry seed | 688.73 | HC |
| SRR4098172 | seedling | Cold (4C) | 18.04 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 176.15 | HC |
| SRR3140953 | leaf | "45C, 0h" | 12.07 | HC |
| SRR6810102 | seedling | seedling | 225.05 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1165.76 | HC |
| SRR10956502 | panicle | WT | 35.72 | HC |
| SRR10956501 | panicle | WT | 32.96 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 2024.22 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 124.52 | HC |
| SRR8258048 | leaf_sheath | R_bph | 1868.83 | HC |
| SRR1740023 | seedling | IR64-Control | 120.39 | HC |
| SRR1740025 | seedling | PK-Control | 125.72 | HC |
| SRR1740024 | seedling | N22-Control | 95.93 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 79.82 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 59.74 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 372.90 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 427.55 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1826.65 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 395.14 | HC |
| SRR3110557 | shoot | shoot treated | 293.21 | HC |
| SRR5940086 | panicle | Wild type | 22.14 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 549.02 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1159.39 | HC |
| SRR8258051 | leaf_sheath | R_bph | 2508.10 | HC |