| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 13.44 | MC |
| SRR3140955 | leaf | "45C, 12h" | 0.20 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 14.09 | MC |
| SRR8258050 | leaf_sheath | R_bph | 12.18 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 0.49 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 20.23 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 4.81 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 3.78 | MC |
| SRR7058097 | leaf | rice_mock | 5.01 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.46 | MC |
| SRR7058098 | leaf | rice_RSV | 4.72 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 1.09 | MC |
| SRR2154074 | seed | Nipponbare_seed | 1.60 | MC |
| SRR2154072 | seed | Rathuwee_seed | 1.09 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 0.18 | MC |
| SRR2154070 | seed | Guangluai4_seed | 1.36 | MC |
| SRR2154071 | seed | KDM105_seed | 0.57 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 1.10 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 1.65 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.65 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 0.64 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 5.33 | MC |
| SRR1013787 | panicle | PA64s_PA | 2.09 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 2.15 | MC |
| SRR504363 | leaf | 93-11 X NPB | 10.49 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 3.22 | MC |
| SRR1013789 | panicle | 93-11_PA | 0.86 | MC |
| SRR1013788 | panicle | LYP9_PA | 3.53 | MC |
| SRR9070101 | shoot_base | WT_base | 0.30 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 13.13 | MC |
| SRR447130 | root | As(III) 20 uM | 0.52 | MC |
| SRR1849765 | leaf | Control 30min | 1.80 | MC |
| SRR1849767 | leaf | Control 30min | 3.17 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.27 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 5.43 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.89 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1.31 | MC |
| SRR6498701 | leaf | "WT, Control" | 1.94 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 26.89 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1.63 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 3.14 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 2.13 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1.04 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 1.82 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1.68 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1.99 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 4.33 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 3.21 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2.14 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 4.06 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.64 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.42 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 0.76 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 2.51 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 3.19 | MC |
| SRR1849773 | leaf | Control 120min | 5.49 | MC |
| SRR1849771 | leaf | Control 120min | 1.48 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 3.69 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 9.22 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2.28 | MC |
| SRR3130370 | leaf | control 8 hour | 7.28 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 3.86 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 6.21 | MC |
| SRR7058096 | leaf | rice_mock | 6.10 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.76 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 3.02 | MC |
| SRR6365689 | seedling | Wild type | 0.83 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.44 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 0.78 | MC |
| SRR10704060 | leaf | Glyphosate | 1.15 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 0.86 | MC |
| SRR2154075 | seed | Taipei309_seed | 1.44 | MC |
| SRR3140952 | leaf | "45C, 0h" | 1.55 | MC |
| SRR976171 | lamina_joint | wild type | 0.84 | MC |
| SRR089772 | panicle | wild-type | 0.81 | MC |
| SRR4098209 | leaf | No treatment | 7.65 | MC |
| SRR3130369 | leaf | control 8 hour | 6.72 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 11.04 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.35 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.81 | MC |
| SRR9070100 | shoot_base | WT_base | 0.48 | MC |
| SRR4098205 | seedling | Heat (50C) | 6.25 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.93 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.76 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.80 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.64 | MC |
| SRR3130365 | leaf | control 0 hour | 5.47 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 7.53 | MC |
| SRR3130366 | leaf | control 0 hour | 2.91 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 0.81 | MC |
| SRR2862364 | leaf | mock leaf cells | 9.20 | MC |
| SRR2862365 | leaf | mock leaf cells | 3.75 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 11.26 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 0.80 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 3.35 | MC |
| SRR2862363 | leaf | mock leaf cells | 6.92 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.95 | MC |
| SRR9070102 | shoot_base | WT_base | 0.42 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.50 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.23 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.62 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.79 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 0.57 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.78 | MC |
| SRR6365690 | seedling | Wild type | 0.35 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.30 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1.29 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1.78 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 2.69 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 0.44 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.30 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 7.86 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 4.25 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.38 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.31 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.96 | MC |
| SRR1849784 | root | Control 120min | 4.71 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.26 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.82 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1.41 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 1.55 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1.49 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.16 | MC |
| SRR3110556 | shoot | shoot control | 23.92 | MC |
| SRR1061614 | panicle | Normal | 0.21 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 9.46 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 1.38 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 1.22 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.79 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 2.39 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 3.53 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 4.20 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 8.02 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 0.30 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.45 | MC |
| SRR3140954 | leaf | "45C, 12h" | 2.57 | MC |
| SRR3140957 | leaf | "45C, 24h" | 5.37 | MC |
| SRR504360 | leaf | Nipponbare | 22.50 | MC |
| SRR504361 | leaf | Nov-93 | 19.11 | MC |
| SRR4098172 | seedling | Cold (4C) | 7.52 | MC |
| SRR3140956 | leaf | "45C, 24h" | 0.95 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.27 | MC |
| SRR3140953 | leaf | "45C, 0h" | 1.52 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 6.36 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 2.70 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 8.30 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1.51 | MC |
| SRR8258048 | leaf_sheath | R_bph | 10.14 | MC |
| SRR1740024 | seedling | N22-Control | 1.07 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 0.39 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 0.43 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.30 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 7.81 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.20 | MC |
| SRR1654490 | leaf | wild type | 3.24 | MC |
| SRR3110557 | shoot | shoot treated | 9.59 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 3.53 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.72 | MC |
| SRR8258051 | leaf_sheath | R_bph | 8.71 | MC |
| SRR504362 | leaf | NPB X 93-11 | 16.37 | MC |