| SRR3140955 | leaf | "45C, 12h" | 1.60 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 1.49 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 0.39 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 57.46 | MC |
| SRR10690152 | leaf | IRBB5_0h | 15.13 | MC |
| SRR6810106 | panicle | panicle | 0.44 | MC |
| SRR7058097 | leaf | rice_mock | 2.99 | MC |
| SRR7058098 | leaf | rice_RSV | 2.49 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 17.90 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 0.97 | MC |
| SRR10690151 | leaf | IRBB5_0h | 9.77 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.22 | MC |
| SRR1061622 | flag_leaf | Normal | 0.39 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.21 | MC |
| SRR1061620 | flag_leaf | Normal | 0.88 | MC |
| SRR10704058 | leaf | Glyphosate | 1.48 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 0.90 | MC |
| SRR9070101 | shoot_base | WT_base | 0.81 | MC |
| SRR447135 | shoot | As(III) 20 uM | 3.08 | MC |
| SRR447134 | shoot | As(III) 80 uM | 6.39 | MC |
| SRR447133 | shoot | As(III) 20 uM | 2.78 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 2.99 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 3.42 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1.18 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 1.60 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 0.55 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1.48 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 8.46 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 9.99 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 6.17 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 3.19 | MC |
| SRR1849773 | leaf | Control 120min | 2.20 | MC |
| SRR1849772 | leaf | Control 120min | 1.22 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1.06 | MC |
| SRR7058096 | leaf | rice_mock | 2.58 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 2.42 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 1.18 | MC |
| SRR447136 | shoot | As(III) 80 uM | 3.69 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 1.15 | MC |
| SRR10704060 | leaf | Glyphosate | 2.31 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 1.15 | MC |
| SRR3140952 | leaf | "45C, 0h" | 1.16 | MC |
| SRR976171 | lamina_joint | wild type | 9.91 | MC |
| SRR4098208 | root | No treatment | 0.27 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.40 | MC |
| SRR9070100 | shoot_base | WT_base | 1.06 | MC |
| SRR4098205 | seedling | Heat (50C) | 7.93 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 0.27 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.21 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.27 | MC |
| SRR8649147 | panicle | panicle tissue | 0.32 | MC |
| SRR4098207 | panicle | No treatment | 6.31 | MC |
| SRR10704055 | leaf | CK | 4.18 | MC |
| SRR10704057 | leaf | CK | 7.51 | MC |
| SRR10704056 | leaf | CK | 6.18 | MC |
| SRR10704059 | leaf | Glyphosate | 6.87 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.27 | MC |
| SRR9070102 | shoot_base | WT_base | 0.81 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 24.52 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 17.74 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 17.73 | MC |
| SRR10690143 | leaf | IR24_0h | 18.19 | MC |
| SRR2646852 | panicle | FP | 1.04 | MC |
| SRR2646853 | panicle | FP | 2.48 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.87 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.67 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 22.42 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 21.99 | MC |
| SRR2646854 | panicle | SP | 0.83 | MC |
| SRR2646855 | panicle | SP | 2.69 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 0.92 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 1.56 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 1.19 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 1.26 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 1.66 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 1.76 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 2.07 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 1.06 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 3.77 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 0.52 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.62 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 0.98 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.45 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.77 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 3.38 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 5.02 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 17.86 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 21.47 | MC |
| SRR10690153 | leaf | IRBB5_0h | 13.63 | MC |
| SRR3110556 | shoot | shoot control | 2.88 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.51 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 3.34 | MC |
| SRR1061613 | panicle | Heat Stress | 0.21 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 2.20 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 0.96 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 13.37 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 14.93 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 2.69 | MC |
| SRR3140954 | leaf | "45C, 12h" | 1.45 | MC |
| SRR089621 | panicle | cold | 3.81 | MC |
| SRR3140957 | leaf | "45C, 24h" | 4.95 | MC |
| SRR089622 | panicle | salt | 5.90 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 4.04 | MC |
| SRR2544786 | embryo | dry seed | 2.83 | MC |
| SRR4098172 | seedling | Cold (4C) | 6.81 | MC |
| SRR3140956 | leaf | "45C, 24h" | 3.12 | MC |
| SRR3140953 | leaf | "45C, 0h" | 2.73 | MC |
| SRR10956502 | panicle | WT | 0.32 | MC |
| SRR1740025 | seedling | PK-Control | 0.49 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 0.58 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 1.06 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.43 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 1.41 | MC |
| SRR3110557 | shoot | shoot treated | 3.29 | MC |
| SRR5940086 | panicle | Wild type | 0.26 | MC |