| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 11.37 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 4.41 | MC |
| SRR8258050 | leaf_sheath | R_bph | 3.12 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 13.82 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 10.60 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 16.17 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 4.79 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 3.37 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 4.38 | MC |
| SRR2154077 | seedling | KDM105_seedling | 4.14 | MC |
| SRR2154074 | seed | Nipponbare_seed | 3.78 | MC |
| SRR2154070 | seed | Guangluai4_seed | 3.66 | MC |
| SRR2154071 | seed | KDM105_seed | 1.39 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 2.35 | MC |
| SRR1061625 | panicle | Heat Stress | 0.24 | MC |
| SRR1061624 | panicle | Normal | 1.28 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.91 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 8.29 | MC |
| SRR9070101 | shoot_base | WT_base | 0.73 | MC |
| SRR089619 | panicle | control | 5.82 | MC |
| SRR447134 | shoot | As(III) 80 uM | 1.40 | MC |
| SRR447130 | root | As(III) 20 uM | 0.52 | MC |
| SRR1849765 | leaf | Control 30min | 0.90 | MC |
| SRR1849767 | leaf | Control 30min | 1.36 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 4.02 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 0.71 | MC |
| SRR6498701 | leaf | "WT, Control" | 4.26 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 6.54 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 20.92 | MC |
| SRR3203907 | leaf | WT | 3.29 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 2.65 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 4.87 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 4.09 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 7.09 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2.65 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.23 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.55 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.08 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 2.51 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 1.06 | MC |
| SRR1849773 | leaf | Control 120min | 1.65 | MC |
| SRR1849772 | leaf | Control 120min | 1.83 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 2.64 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 2.62 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2.87 | MC |
| SRR3130370 | leaf | control 8 hour | 4.91 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 6.87 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 2.16 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 7.28 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.79 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.62 | MC |
| SRR10704060 | leaf | Glyphosate | 8.10 | MC |
| SRR2154075 | seed | Taipei309_seed | 1.50 | MC |
| SRR976171 | lamina_joint | wild type | 14.70 | MC |
| SRR4098208 | root | No treatment | 8.96 | MC |
| SRR089774 | panicle | wild-type | 6.64 | MC |
| SRR089772 | panicle | wild-type | 2.42 | MC |
| SRR3130369 | leaf | control 8 hour | 5.94 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 3.44 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.15 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.81 | MC |
| SRR9070100 | shoot_base | WT_base | 0.81 | MC |
| SRR4098205 | seedling | Heat (50C) | 4.03 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.97 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.62 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.31 | MC |
| SRR3130365 | leaf | control 0 hour | 6.79 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.36 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 3.54 | MC |
| SRR3130366 | leaf | control 0 hour | 6.97 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 11.06 | MC |
| SRR8649147 | panicle | panicle tissue | 0.47 | MC |
| SRR4098207 | panicle | No treatment | 3.38 | MC |
| SRR10704055 | leaf | CK | 0.24 | MC |
| SRR10704057 | leaf | CK | 0.28 | MC |
| SRR10704059 | leaf | Glyphosate | 1.25 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.58 | MC |
| SRR9070102 | shoot_base | WT_base | 0.53 | MC |
| SRR6498699 | leaf | "WT, Control" | 3.41 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.40 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.11 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.80 | MC |
| SRR4098203 | seedling | No treatment | 6.34 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.26 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 2.38 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 20.57 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 6.72 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 13.18 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 6.42 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 2.27 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 5.50 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 4.97 | MC |
| SRR3110556 | shoot | shoot control | 29.56 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 7.19 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.80 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 5.84 | MC |
| SRR1061613 | panicle | Heat Stress | 1.33 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 5.04 | MC |
| SRR1061618 | flag_leaf | Normal | 0.34 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 1.00 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.50 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 6.14 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 4.92 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 6.07 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.45 | MC |
| SRR089621 | panicle | cold | 4.21 | MC |
| SRR089620 | panicle | drought | 6.57 | MC |
| SRR089622 | panicle | salt | 5.90 | MC |
| SRR504361 | leaf | Nov-93 | 1.32 | MC |
| SRR2544786 | embryo | dry seed | 5.06 | MC |
| SRR4098172 | seedling | Cold (4C) | 7.05 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.79 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 7.77 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 14.20 | MC |
| SRR8258048 | leaf_sheath | R_bph | 3.67 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.86 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.47 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 14.64 | MC |
| SRR1654490 | leaf | wild type | 3.59 | MC |
| SRR5940086 | panicle | Wild type | 1.17 | MC |
| SRR8258051 | leaf_sheath | R_bph | 2.70 | MC |
| SRR504362 | leaf | NPB X 93-11 | 30.98 | MC |