| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 327.18 | HC |
| SRR3140955 | leaf | "45C, 12h" | 21.76 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 314.54 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 109.79 | HC |
| SRR8258050 | leaf_sheath | R_bph | 191.63 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 1705.22 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 328.70 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 179.61 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 74.72 | HC |
| SRR10690152 | leaf | IRBB5_0h | 1224.47 | HC |
| SRR6810106 | panicle | panicle | 368.23 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 437.40 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 129.45 | HC |
| SRR7058098 | leaf | rice_RSV | 50.43 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1712.43 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 103.72 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 65.53 | HC |
| SRR2154077 | seedling | KDM105_seedling | 102.24 | HC |
| SRR2154074 | seed | Nipponbare_seed | 126.97 | HC |
| SRR10690151 | leaf | IRBB5_0h | 1433.77 | HC |
| SRR2154072 | seed | Rathuwee_seed | 156.76 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 149.88 | HC |
| SRR2154070 | seed | Guangluai4_seed | 272.12 | HC |
| SRR2154071 | seed | KDM105_seed | 202.07 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 17.40 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 94.05 | HC |
| SRR1061625 | panicle | Heat Stress | 541.66 | HC |
| SRR1061624 | panicle | Normal | 1022.95 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 320.59 | HC |
| SRR1061622 | flag_leaf | Normal | 2168.88 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 3748.51 | HC |
| SRR1061620 | flag_leaf | Normal | 4077.87 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1784.28 | HC |
| SRR10704058 | leaf | Glyphosate | 481.04 | HC |
| SRR447128 | root | As(III) 20 uM | 8.15 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2239.93 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 222.20 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 731.33 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 67.92 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 84.33 | HC |
| SRR1013787 | panicle | PA64s_PA | 74.52 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 22.59 | HC |
| SRR504363 | leaf | 93-11 X NPB | 1787.07 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 485.72 | HC |
| SRR1013789 | panicle | 93-11_PA | 29.49 | HC |
| SRR1013788 | panicle | LYP9_PA | 49.49 | HC |
| SRR9070101 | shoot_base | WT_base | 29.99 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 140.19 | HC |
| SRR6810105 | panicle | panicle | 338.30 | HC |
| SRR089619 | panicle | control | 146.46 | HC |
| SRR447135 | shoot | As(III) 20 uM | 37.36 | HC |
| SRR447134 | shoot | As(III) 80 uM | 26.13 | HC |
| SRR447133 | shoot | As(III) 20 uM | 29.28 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 83.89 | HC |
| SRR447131 | root | As(III) 80 uM | 26.55 | HC |
| SRR447130 | root | As(III) 20 uM | 19.62 | HC |
| SRR1849765 | leaf | Control 30min | 3071.25 | HC |
| SRR1849767 | leaf | Control 30min | 2048.31 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 588.06 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 2631.83 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 180.02 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1595.81 | HC |
| SRR6498701 | leaf | "WT, Control" | 1516.12 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 1239.87 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1260.02 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 253.97 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1585.28 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 659.96 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 588.55 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 229.96 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 424.28 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 196.33 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 320.94 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 327.05 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 460.62 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 370.76 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 946.73 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 503.83 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 804.47 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 896.30 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 851.43 | HC |
| SRR447129 | root | As(III) 80 uM | 17.25 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 746.74 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 2374.97 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 3771.15 | HC |
| SRR1849773 | leaf | Control 120min | 3875.46 | HC |
| SRR1849772 | leaf | Control 120min | 1602.37 | HC |
| SRR1849771 | leaf | Control 120min | 3626.90 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 2504.97 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 355.83 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 662.42 | HC |
| SRR3130370 | leaf | control 8 hour | 1090.76 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 643.43 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 444.17 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 173.61 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 387.04 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 73.20 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 163.25 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 754.16 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 2278.27 | HC |
| SRR6365689 | seedling | Wild type | 368.80 | HC |
| SRR447136 | shoot | As(III) 80 uM | 37.47 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 886.65 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 1251.39 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 201.79 | HC |
| SRR10704060 | leaf | Glyphosate | 688.46 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 1659.28 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 173.16 | HC |
| SRR2154075 | seed | Taipei309_seed | 70.16 | HC |
| SRR3140952 | leaf | "45C, 0h" | 50.84 | HC |
| SRR976171 | lamina_joint | wild type | 310.64 | HC |
| SRR4098208 | root | No treatment | 26.51 | HC |
| SRR4098209 | leaf | No treatment | 51.59 | HC |
| SRR3130369 | leaf | control 8 hour | 1047.35 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 1045.78 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 940.95 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 964.14 | HC |
| SRR9070100 | shoot_base | WT_base | 14.23 | HC |
| SRR4098205 | seedling | Heat (50C) | 41.36 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 921.89 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 762.58 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 682.27 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 832.53 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 600.97 | HC |
| SRR3130365 | leaf | control 0 hour | 1192.85 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 789.77 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 761.38 | HC |
| SRR3130366 | leaf | control 0 hour | 1363.62 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 162.42 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 161.02 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 145.00 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 133.69 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 174.64 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 168.52 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 193.85 | HC |
| SRR2862364 | leaf | mock leaf cells | 150.31 | HC |
| SRR2862365 | leaf | mock leaf cells | 146.56 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 342.45 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 216.11 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 50.42 | HC |
| SRR2862363 | leaf | mock leaf cells | 406.75 | HC |
| SRR4098207 | panicle | No treatment | 15.19 | HC |
| SRR10704055 | leaf | CK | 197.82 | HC |
| SRR10704057 | leaf | CK | 660.13 | HC |
| SRR10704056 | leaf | CK | 203.83 | HC |
| SRR10704059 | leaf | Glyphosate | 101.76 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 1191.10 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 839.71 | HC |
| SRR9070102 | shoot_base | WT_base | 16.98 | HC |
| SRR6498699 | leaf | "WT, Control" | 1201.95 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 80.32 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 100.76 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 795.30 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1029.94 | HC |
| SRR10690144 | leaf | IR24_0h | 29.70 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3712.48 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1540.18 | HC |
| SRR10690143 | leaf | IR24_0h | 1778.19 | HC |
| SRR10690142 | leaf | IR24_0h | 75.08 | HC |
| SRR2646852 | panicle | FP | 766.05 | HC |
| SRR2646853 | panicle | FP | 1101.96 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 855.03 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 684.92 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1959.52 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 330.94 | HC |
| SRR2646854 | panicle | SP | 704.50 | HC |
| SRR2646855 | panicle | SP | 817.92 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 237.96 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 164.62 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 496.41 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 323.80 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 230.24 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 176.76 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 175.87 | HC |
| SRR6365690 | seedling | Wild type | 314.78 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 89.35 | HC |
| SRR6365692 | panicle | Wild type | 476.82 | HC |
| SRR6365693 | panicle | Wild type | 493.08 | HC |
| SRR6365694 | panicle | Wild type | 497.89 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 370.08 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 426.87 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 275.83 | HC |
| SRR6810101 | seedling | seedling | 1470.80 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 125.71 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 80.60 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 188.97 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 94.54 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 245.20 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 141.12 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 49.12 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 72.20 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 149.81 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1886.94 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1042.50 | HC |
| SRR1849784 | root | Control 120min | 563.29 | HC |
| SRR6365691 | panicle | Wild type | 512.01 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 345.24 | HC |
| SRR10690153 | leaf | IRBB5_0h | 2318.56 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 300.57 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 296.74 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 298.34 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1449.95 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 271.48 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 211.06 | HC |
| SRR3110556 | shoot | shoot control | 39.24 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 375.42 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 878.77 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 403.18 | HC |
| SRR1061616 | panicle | Normal | 752.58 | HC |
| SRR1061617 | panicle | Heat Stress | 649.83 | HC |
| SRR1061614 | panicle | Normal | 525.86 | HC |
| SRR1061615 | panicle | Heat Stress | 652.54 | HC |
| SRR1061612 | panicle | Normal | 486.19 | HC |
| SRR1061613 | panicle | Heat Stress | 720.41 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 320.05 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 778.68 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 42.40 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 801.86 | HC |
| SRR1061618 | flag_leaf | Normal | 1509.10 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 2599.97 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 884.72 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 413.22 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 990.53 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 40.22 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 81.60 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 95.95 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 96.79 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 287.97 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1024.74 | HC |
| SRR3140954 | leaf | "45C, 12h" | 205.67 | HC |
| SRR089621 | panicle | cold | 202.09 | HC |
| SRR089620 | panicle | drought | 241.53 | HC |
| SRR3140957 | leaf | "45C, 24h" | 426.84 | HC |
| SRR089622 | panicle | salt | 185.59 | HC |
| SRR504360 | leaf | Nipponbare | 1823.98 | HC |
| SRR504361 | leaf | Nov-93 | 837.37 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 333.73 | HC |
| SRR2544786 | embryo | dry seed | 235.50 | HC |
| SRR4098172 | seedling | Cold (4C) | 47.25 | HC |
| SRR3140956 | leaf | "45C, 24h" | 252.97 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 817.51 | HC |
| SRR3140953 | leaf | "45C, 0h" | 98.36 | HC |
| SRR6810102 | seedling | seedling | 1790.49 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 151.65 | HC |
| SRR10956502 | panicle | WT | 438.58 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 170.49 | HC |
| SRR10956501 | panicle | WT | 465.59 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 216.95 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 512.30 | HC |
| SRR8258048 | leaf_sheath | R_bph | 385.37 | HC |
| SRR1740023 | seedling | IR64-Control | 69.29 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 32.61 | HC |
| SRR1740025 | seedling | PK-Control | 57.38 | HC |
| SRR1740024 | seedling | N22-Control | 88.03 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 1901.36 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 2043.23 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 893.11 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 892.56 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 170.46 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 126.30 | HC |
| SRR1654490 | leaf | wild type | 26.94 | HC |
| SRR3110557 | shoot | shoot treated | 149.00 | HC |
| SRR5940086 | panicle | Wild type | 331.97 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 68.44 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 100.00 | HC |
| SRR8258051 | leaf_sheath | R_bph | 231.09 | HC |
| SRR504362 | leaf | NPB X 93-11 | 790.97 | HC |