| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.05 | LC |
| SRR1061622 | flag_leaf | Normal | 0.08 | LC |
| SRR1061621 | flag_leaf | Heat Stress | 0.14 | LC |
| SRR1061620 | flag_leaf | Normal | 0.06 | LC |
| SRR1013785 | flag_leaf | LYP9_FL | 0.24 | LC |
| SRR1013784 | flag_leaf | PA64s_FL | 0.33 | LC |
| SRR1013787 | panicle | PA64s_PA | 0.24 | LC |
| SRR504363 | leaf | 93-11 X NPB | 0.24 | LC |
| SRR089619 | panicle | control | 0.22 | LC |
| SRR447135 | shoot | As(III) 20 uM | 0.18 | LC |
| SRR447133 | shoot | As(III) 20 uM | 0.23 | LC |
| SRR1849765 | leaf | Control 30min | 0.45 | LC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 0.60 | LC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 0.48 | LC |
| SRR6498701 | leaf | "WT, Control" | 0.39 | LC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 0.36 | LC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 0.15 | LC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.15 | LC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.10 | LC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.12 | LC |
| SRR1849772 | leaf | Control 120min | 0.61 | LC |
| SRR1849771 | leaf | Control 120min | 0.49 | LC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.14 | LC |
| SRR447136 | shoot | As(III) 80 uM | 0.26 | LC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.09 | LC |
| SRR5120083 | leaf_sheath | P15_6 | 0.10 | LC |
| SRR976171 | lamina_joint | wild type | 0.34 | LC |
| SRR4098208 | root | No treatment | 0.09 | LC |
| SRR4098209 | leaf | No treatment | 0.25 | LC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.14 | LC |
| SRR4098205 | seedling | Heat (50C) | 0.24 | LC |
| SRR6810104 | flag_leaf | flag_leaf | 0.33 | LC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.10 | LC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.13 | LC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.09 | LC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.16 | LC |
| SRR2862365 | leaf | mock leaf cells | 0.32 | LC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 0.16 | LC |
| SRR8649147 | panicle | panicle tissue | 0.08 | LC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.11 | LC |
| SRR6498699 | leaf | "WT, Control" | 0.14 | LC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.10 | LC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 0.22 | LC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 0.11 | LC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.13 | LC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.05 | LC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.10 | LC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.10 | LC |
| SRR1061614 | panicle | Normal | 0.05 | LC |
| SRR1061615 | panicle | Heat Stress | 0.06 | LC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.12 | LC |
| SRR6810103 | flag_leaf | flag_leaf | 0.32 | LC |
| SRR1061619 | flag_leaf | Heat Stress | 0.07 | LC |
| SRR9937394 | spikelet | sRNA apical spikelets | 0.40 | LC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.07 | LC |
| SRR2544788 | embryo | 24 hours imbibition | 0.15 | LC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.12 | LC |
| SRR089622 | panicle | salt | 0.18 | LC |
| SRR504360 | leaf | Nipponbare | 0.26 | LC |
| SRR4098172 | seedling | Cold (4C) | 0.24 | LC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.16 | LC |
| SRR3140953 | leaf | "45C, 0h" | 0.08 | LC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 0.28 | LC |
| SRR5120081 | leaf_sheath | PC_48 | 0.10 | LC |
| SRR5120080 | leaf_sheath | PC_6 | 0.42 | LC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.10 | LC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.06 | LC |