| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 0.49 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.59 | MC |
| SRR8258050 | leaf_sheath | R_bph | 2.17 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 0.68 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.65 | MC |
| SRR6810106 | panicle | panicle | 1.08 | MC |
| SRR7058097 | leaf | rice_mock | 3.23 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.30 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.29 | MC |
| SRR7058098 | leaf | rice_RSV | 4.13 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.36 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 0.42 | MC |
| SRR2154074 | seed | Nipponbare_seed | 7.77 | MC |
| SRR10690151 | leaf | IRBB5_0h | 0.32 | MC |
| SRR2154072 | seed | Rathuwee_seed | 1.33 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 3.96 | MC |
| SRR2154071 | seed | KDM105_seed | 0.60 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.37 | MC |
| SRR1061625 | panicle | Heat Stress | 2.68 | MC |
| SRR1061624 | panicle | Normal | 4.25 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 0.92 | MC |
| SRR1061622 | flag_leaf | Normal | 0.47 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.35 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.44 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 0.30 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 7.58 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 2.16 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 3.81 | MC |
| SRR1013787 | panicle | PA64s_PA | 3.51 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.93 | MC |
| SRR1013788 | panicle | LYP9_PA | 1.75 | MC |
| SRR9070101 | shoot_base | WT_base | 0.47 | MC |
| SRR089619 | panicle | control | 0.44 | MC |
| SRR447135 | shoot | As(III) 20 uM | 2.00 | MC |
| SRR447134 | shoot | As(III) 80 uM | 1.40 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 1.15 | MC |
| SRR447130 | root | As(III) 20 uM | 0.51 | MC |
| SRR1849765 | leaf | Control 30min | 6.31 | MC |
| SRR1849767 | leaf | Control 30min | 4.53 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 6.63 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1.53 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 8.29 | MC |
| SRR6498701 | leaf | "WT, Control" | 8.92 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 8.51 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1.16 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 0.91 | MC |
| SRR3203907 | leaf | WT | 0.31 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 6.34 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.29 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.33 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.43 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.49 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.30 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.60 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.20 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 0.44 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.30 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1.12 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5.62 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6.31 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.35 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 0.76 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 4.40 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 7.45 | MC |
| SRR1849773 | leaf | Control 120min | 5.49 | MC |
| SRR1849772 | leaf | Control 120min | 5.50 | MC |
| SRR1849771 | leaf | Control 120min | 5.43 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 7.91 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.72 | MC |
| SRR3130370 | leaf | control 8 hour | 0.64 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 0.62 | MC |
| SRR7058096 | leaf | rice_mock | 4.44 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.76 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 1.30 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 0.39 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5.50 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.58 | MC |
| SRR6365689 | seedling | Wild type | 0.28 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6.02 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 0.49 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 0.43 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 1.07 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 1.54 | MC |
| SRR976171 | lamina_joint | wild type | 0.74 | MC |
| SRR4098208 | root | No treatment | 0.45 | MC |
| SRR089774 | panicle | wild-type | 2.96 | MC |
| SRR089772 | panicle | wild-type | 5.67 | MC |
| SRR4098209 | leaf | No treatment | 0.89 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 0.44 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.38 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.51 | MC |
| SRR9070100 | shoot_base | WT_base | 0.55 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.60 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3.31 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4.06 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 7.84 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.92 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.88 | MC |
| SRR3130366 | leaf | control 0 hour | 0.57 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 0.18 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.35 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.18 | MC |
| SRR2862364 | leaf | mock leaf cells | 4.75 | MC |
| SRR2862365 | leaf | mock leaf cells | 6.19 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 7.29 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 3.36 | MC |
| SRR2862363 | leaf | mock leaf cells | 3.47 | MC |
| SRR8649147 | panicle | panicle tissue | 4.09 | MC |
| SRR4098207 | panicle | No treatment | 0.55 | MC |
| SRR10704057 | leaf | CK | 0.46 | MC |
| SRR10704059 | leaf | Glyphosate | 0.54 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.18 | MC |
| SRR9070102 | shoot_base | WT_base | 0.35 | MC |
| SRR6498699 | leaf | "WT, Control" | 8.81 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 2.24 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.84 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.32 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.35 | MC |
| SRR10690142 | leaf | IR24_0h | 0.47 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2.47 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 6.49 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 0.85 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 0.30 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 1.00 | MC |
| SRR4098203 | seedling | No treatment | 1.10 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 0.99 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.52 | MC |
| SRR6365690 | seedling | Wild type | 0.35 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.91 | MC |
| SRR6365692 | panicle | Wild type | 4.09 | MC |
| SRR6365693 | panicle | Wild type | 1.83 | MC |
| SRR6365694 | panicle | Wild type | 1.57 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 0.90 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1.30 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.45 | MC |
| SRR6810101 | seedling | seedling | 3.79 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 0.55 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 1.06 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 0.88 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 0.54 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.76 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.26 | MC |
| SRR1849784 | root | Control 120min | 1.04 | MC |
| SRR6365691 | panicle | Wild type | 1.75 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.54 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.40 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.71 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.29 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.32 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.30 | MC |
| SRR3110556 | shoot | shoot control | 7.26 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.40 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3.58 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 2.84 | MC |
| SRR1061616 | panicle | Normal | 0.79 | MC |
| SRR1061612 | panicle | Normal | 1.86 | MC |
| SRR1061613 | panicle | Heat Stress | 3.11 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 0.70 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5.34 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.80 | MC |
| SRR1061618 | flag_leaf | Normal | 1.70 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 1.07 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4.59 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 1.20 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 1.76 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 6.59 | MC |
| SRR089621 | panicle | cold | 0.60 | MC |
| SRR089622 | panicle | salt | 0.54 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 2.19 | MC |
| SRR2544786 | embryo | dry seed | 1.24 | MC |
| SRR4098172 | seedling | Cold (4C) | 0.48 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5.88 | MC |
| SRR6810102 | seedling | seedling | 5.35 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1.70 | MC |
| SRR10956502 | panicle | WT | 2.95 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 5.26 | MC |
| SRR10956501 | panicle | WT | 2.59 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 0.90 | MC |
| SRR8258048 | leaf_sheath | R_bph | 0.86 | MC |
| SRR1740023 | seedling | IR64-Control | 0.28 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.93 | MC |
| SRR1740024 | seedling | N22-Control | 1.28 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 1.18 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 0.86 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 6.81 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3.49 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 0.96 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 1.70 | MC |
| SRR1654490 | leaf | wild type | 15.74 | MC |
| SRR3110557 | shoot | shoot treated | 4.57 | MC |
| SRR5940086 | panicle | Wild type | 5.99 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.28 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.00 | MC |
| SRR8258051 | leaf_sheath | R_bph | 1.50 | MC |