| SRR4457263 | 2nd_leaf | DAH36 | 14.92 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 18.65 | MC |
| SRR5560727 | caryopsis | wild_type | 5.56 | MC |
| SRR5560728 | caryopsis | wild_type | 4.06 | MC |
| SRR5560729 | caryopsis | wild_type | 10.71 | MC |
| SRR7265412 | coleoptile | 4dA | 0.83 | MC |
| SRR7265413 | coleoptile | 4dA | 1.13 | MC |
| SRR976168 | flag_leaf | wild_type | 3.64 | MC |
| SRR4457247 | flag_leaf | DAH44 | 15.32 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.99 | MC |
| SRR8240824 | leaf | wild_type | 5.81 | MC |
| SRR8240825 | leaf | wild_type | 5.97 | MC |
| SRR8240826 | leaf | wild_type | 6.51 | MC |
| SRR8240818 | leaf | wild_type | 8.55 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.33 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.84 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.62 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.66 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.32 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.70 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.73 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.69 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.82 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.04 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.72 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.63 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.12 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.45 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.45 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.80 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.23 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 17.23 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.39 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.52 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.31 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.97 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.85 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.58 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.91 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.40 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.69 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.71 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.77 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 8.71 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.59 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.15 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.10 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.08 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 12.09 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 11.59 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.10 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.08 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 12.09 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 11.59 | MC |
| SRR1761528 | leaf | drought | 1.10 | MC |
| SRR1761529 | leaf | drought | 1.08 | MC |
| SRR1761530 | leaf | control | 12.09 | MC |
| SRR1761531 | leaf | control | 11.59 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.42 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 5.51 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 3.89 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.27 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.79 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 11.41 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 13.96 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.91 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.41 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.59 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.42 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 10.03 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 8.09 | MC |
| SRR8611901 | leaf | Non-inoculated | 9.25 | MC |
| SRR8611902 | leaf | Non-inoculated | 8.32 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.16 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.88 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.94 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.85 | MC |
| SRR6502088 | leaf | control | 1.38 | MC |
| SRR6502089 | leaf | control | 0.62 | MC |
| SRR6502090 | leaf | control | 1.22 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502100 | leaf | control | 1.59 | MC |
| SRR6502101 | leaf | control | 0.90 | MC |
| SRR6502102 | leaf | control | 0.91 | MC |
| SRR5856927 | leaf | control | 1.77 | MC |
| SRR5856928 | leaf | control | 1.25 | MC |
| SRR5856929 | leaf | control | 1.37 | MC |
| SRR5856930 | leaf | salt | 0.32 | MC |
| SRR5856931 | leaf | salt | 0.38 | MC |
| SRR5856932 | leaf | salt | 0.30 | MC |
| SRR5856933 | leaf | control | 1.53 | MC |
| SRR5856934 | leaf | control | 1.45 | MC |
| SRR5856935 | leaf | control | 1.75 | MC |
| SRR5856936 | leaf | salt | 0.42 | MC |
| SRR5856937 | leaf | salt | 0.31 | MC |
| SRR5856938 | leaf | salt | 0.24 | MC |
| SRR8582889 | panicle | AM | 0.29 | MC |
| SRR8582890 | panicle | AM | 1.94 | MC |
| SRR8582891 | panicle | PM | 22.52 | MC |
| SRR8582892 | panicle | PM | 23.68 | MC |
| SRR8582893 | panicle | PM | 17.64 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 2.73 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.58 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.49 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.47 | MC |
| SRR5126153 | root | "mock,7_days" | 0.71 | MC |
| SRR5126155 | root | "mock,7_days" | 0.58 | MC |
| SRR5126157 | root | "mock,7_days" | 1.02 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.37 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.65 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.02 | MC |
| SRR5126165 | root | "mock,14_days" | 9.41 | MC |
| SRR5126167 | root | "mock,14_days" | 2.37 | MC |
| SRR5126169 | root | "mock,14_days" | 1.31 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.89 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.12 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.35 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.65 | MC |
| SRR1213694 | root | wt | 5.06 | MC |
| SRR6441554 | seedling | wild_type | 2.94 | MC |
| SRR6441555 | seedling | wild_type | 2.75 | MC |
| SRR2154083 | seedling | wt | 13.08 | MC |
| SRR2154087 | seedling | wt | 15.96 | MC |
| SRR3098742 | seedling | wt | 21.30 | MC |
| SRR3098743 | seedling | wt | 18.06 | MC |
| SRR2857719 | seedling | drought_stress_0h | 6.75 | MC |
| SRR2857720 | seedling | drought_stress_1h | 7.39 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.41 | MC |
| SRR1944583 | seedling | no_treatment | 8.20 | MC |
| SRR358791 | seedling | wt | 12.95 | MC |
| SRR358792 | seedling | wt | 15.40 | MC |
| SRR358793 | seedling | wt | 5.32 | MC |
| SRR358794 | seedling | wt | 5.10 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.53 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.93 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.20 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.59 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.54 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.74 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.53 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.97 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.27 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 7.24 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.18 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 6.76 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 10.34 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.63 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.12 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.83 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.73 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.27 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.95 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.23 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.48 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.19 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.69 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.92 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.49 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.42 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.37 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.81 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.05 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.02 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.17 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.30 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.09 | MC |