| SRR4457249 | 2nd_leaf | DAH4 | 1.72 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.64 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.64 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.66 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.78 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.92 | MC |
| SRR5560727 | caryopsis | wild_type | 0.46 | MC |
| SRR5560729 | caryopsis | wild_type | 13.25 | MC |
| SRR4947495 | root | control | 9.59 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.60 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 9.74 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.04 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 8.60 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.19 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.94 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.02 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.97 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.57 | MC |
| SRR976168 | flag_leaf | wild_type | 2.69 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.12 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.72 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.70 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.57 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.72 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.52 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.46 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.26 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.72 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.17 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.73 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.18 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.72 | MC |
| SRR1761530 | leaf | control | 2.16 | MC |
| SRR1761531 | leaf | control | 1.73 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 5.34 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 3.48 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 5.24 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 5.01 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.95 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 4.95 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.24 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.50 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.15 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.82 | MC |
| SRR1213693 | leaf | wt | 0.66 | MC |
| SRR5856927 | leaf | control | 0.39 | MC |
| SRR5856928 | leaf | control | 0.53 | MC |
| SRR5856929 | leaf | control | 0.48 | MC |
| SRR5856934 | leaf | control | 0.45 | MC |
| SRR5856935 | leaf | control | 0.42 | MC |
| SRR5110429 | panicle | Dawn | 2.17 | MC |
| SRR5110430 | panicle | Dawn | 2.00 | MC |
| SRR5110431 | panicle | Dawn | 2.50 | MC |
| SRR5110432 | panicle | Dawn | 3.98 | MC |
| SRR4947496 | root | control | 0.82 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.85 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 7.72 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.83 | MC |
| SRR5110440 | panicle | Dawn + 7h | 10.72 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.17 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 13.02 | MC |
| SRR5110445 | panicle | Dusk | 4.74 | MC |
| SRR5110446 | panicle | Dusk | 10.03 | MC |
| SRR5110448 | panicle | Dusk | 6.49 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.59 | MC |
| SRR5110450 | panicle | Dawn + 14h | 5.59 | MC |
| SRR5110451 | panicle | Dawn + 14h | 7.87 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.80 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 6.23 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 6.34 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 10.01 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.23 | MC |
| SRR5110457 | panicle | Dawn + 21h | 15.60 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.18 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.22 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.90 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 2.97 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 6.55 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.89 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 8.25 | MC |
| SRR5126147 | root | "mock,1_day" | 1.94 | MC |
| SRR5126148 | root | "mock,1_day" | 2.11 | MC |
| SRR5126149 | root | "mock,1_day" | 2.19 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.85 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.74 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.33 | MC |
| SRR5126153 | root | "mock,7_days" | 5.72 | MC |
| SRR5126155 | root | "mock,7_days" | 5.05 | MC |
| SRR5126157 | root | "mock,7_days" | 1.07 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.49 | MC |
| SRR5126165 | root | "mock,14_days" | 3.85 | MC |
| SRR5126167 | root | "mock,14_days" | 8.33 | MC |
| SRR5126169 | root | "mock,14_days" | 8.20 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.62 | MC |
| SRR1213694 | root | wt | 0.31 | MC |
| SRR1213695 | root | wt | 0.64 | MC |
| SRR4947478 | root | control | 3.65 | MC |
| SRR4947479 | root | control | 6.47 | MC |
| SRR4947482 | root | Al | 5.85 | MC |
| SRR4947483 | root | Al | 7.21 | MC |
| SRR4947484 | root | Al | 1.60 | MC |
| SRR4947485 | root | Al | 1.42 | MC |
| SRR4947487 | root | control | 7.58 | MC |
| SRR4947488 | root | control | 1.30 | MC |
| SRR4947489 | root | control | 0.79 | MC |
| SRR4947490 | root | Al | 3.83 | MC |
| SRR4947492 | root | Al | 1.62 | MC |
| SRR4947493 | root | Al | 1.30 | MC |
| SRR4947494 | root | control | 3.00 | MC |
| SRR4947497 | root | control | 1.17 | MC |
| SRR4947498 | root | Al | 10.06 | MC |
| SRR4947499 | root | Al | 10.43 | MC |
| SRR4947500 | root | Al | 2.26 | MC |
| SRR4947501 | root | Al | 2.60 | MC |
| SRR4947502 | root | control | 5.58 | MC |
| SRR4947503 | root | control | 6.77 | MC |
| SRR4947504 | root | control | 1.07 | MC |
| SRR4947506 | root | Al | 4.72 | MC |
| SRR4947508 | root | Al | 1.38 | MC |
| SRR4947509 | root | Al | 0.94 | MC |
| SRR6502091 | root | 100 mM NaCl | 7.69 | MC |
| SRR6502092 | root | 100 mM NaCl | 7.82 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.47 | MC |
| SRR6502094 | root | control | 3.89 | MC |
| SRR6502095 | root | control | 5.02 | MC |
| SRR6502096 | root | control | 3.33 | MC |
| SRR6502103 | root | 100 mM NaCl | 7.05 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.74 | MC |
| SRR6502105 | root | 100 mM NaCl | 7.90 | MC |
| SRR6502106 | root | control | 7.60 | MC |
| SRR6502107 | root | control | 2.98 | MC |
| SRR6502108 | root | control | 5.97 | MC |
| SRR2154086 | seedling | wt | 2.37 | MC |
| SRR2154083 | seedling | wt | 0.96 | MC |
| SRR2154084 | seedling | wt | 1.14 | MC |
| SRR2154087 | seedling | wt | 1.72 | MC |
| SRR3098741 | seedling | wt | 0.86 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.03 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.53 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.62 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.96 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.74 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.93 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.38 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.60 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.85 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.50 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.71 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.86 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.95 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.21 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.40 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.67 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 0.63 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.51 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.34 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.73 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.52 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.75 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.62 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.76 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.70 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.06 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.04 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.04 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.04 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.00 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.59 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.41 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 13.98 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.51 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.34 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.67 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 15.79 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 18.93 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 13.47 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 14.84 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 13.48 | MC |