| SRR4457249 | 2nd_leaf | DAH4 | 2.34 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.58 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.23 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.52 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.15 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.18 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.02 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.34 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.00 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.77 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.64 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.89 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.07 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.22 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.86 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.01 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.02 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.70 | MC |
| SRR3745126 | anther | wt | 1.02 | MC |
| SRR3745127 | anther | wt | 0.76 | MC |
| SRR6320473 | carpel | wt | 14.90 | MC |
| SRR6320498 | carpel | wt | 15.32 | MC |
| SRR5560729 | caryopsis | wild_type | 0.78 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.68 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.87 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.03 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.97 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.98 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.29 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.99 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.11 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.77 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.58 | MC |
| SRR7265375 | embryo | dry seed 0 h | 12.70 | MC |
| SRR2338866 | endosprem | control | 5.27 | MC |
| SRR2338867 | endosprem | control | 8.84 | MC |
| SRR2338868 | endosprem | high_temperature | 6.59 | MC |
| SRR2338869 | endosprem | high_temperature | 4.28 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.77 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.30 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.55 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.11 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.61 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.78 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.69 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.10 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.85 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.46 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.34 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.71 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.39 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.32 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.18 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.21 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.97 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.44 | MC |
| SRR1213691 | flower | wt | 0.82 | MC |
| SRR8060835 | leaf | wild_type | 1.35 | MC |
| SRR8060836 | leaf | wild_type | 1.77 | MC |
| SRR8060837 | leaf | wild_type | 1.20 | MC |
| SRR8240825 | leaf | wild_type | 1.17 | MC |
| SRR8240818 | leaf | wild_type | 0.94 | MC |
| SRR8240819 | leaf | wild_type | 0.66 | MC |
| SRR8240820 | leaf | wild_type | 0.45 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.72 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.26 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.91 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.06 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.87 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.76 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.29 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.81 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.74 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.15 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.81 | MC |
| SRR1761528 | leaf | drought | 0.79 | MC |
| SRR1761529 | leaf | drought | 0.64 | MC |
| SRR1761530 | leaf | control | 1.34 | MC |
| SRR1761531 | leaf | control | 0.84 | MC |
| SRR504365 | leaf | wt | 4.41 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.37 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.69 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.39 | MC |
| SRR6417967 | leaf | H2O_control | 1.87 | MC |
| SRR6417968 | leaf | H2O_control | 0.49 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 11.52 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 8.58 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 24.19 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 14.23 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 11.36 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 10.23 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 14.15 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.57 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.43 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.55 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.67 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.93 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.78 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.94 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.83 | MC |
| SRR1213692 | leaf | wt | 1.40 | MC |
| SRR1213693 | leaf | wt | 0.70 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.60 | MC |
| SRR6502088 | leaf | control | 1.01 | MC |
| SRR6502089 | leaf | control | 0.90 | MC |
| SRR6502090 | leaf | control | 1.03 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.73 | MC |
| SRR6502100 | leaf | control | 1.14 | MC |
| SRR6502101 | leaf | control | 0.84 | MC |
| SRR6502102 | leaf | control | 0.63 | MC |
| SRR5856927 | leaf | control | 4.30 | MC |
| SRR5856928 | leaf | control | 7.37 | MC |
| SRR5856929 | leaf | control | 6.52 | MC |
| SRR5856930 | leaf | salt | 4.84 | MC |
| SRR5856931 | leaf | salt | 6.09 | MC |
| SRR5856932 | leaf | salt | 4.69 | MC |
| SRR5856933 | leaf | control | 15.39 | MC |
| SRR5856934 | leaf | control | 9.58 | MC |
| SRR5856935 | leaf | control | 13.78 | MC |
| SRR5856936 | leaf | salt | 10.16 | MC |
| SRR5856937 | leaf | salt | 7.49 | MC |
| SRR5856938 | leaf | salt | 10.41 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.28 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.51 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.14 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.32 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.47 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.32 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.08 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.77 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.74 | MC |
| SRR6168974 | leaf | none (control) | 12.61 | MC |
| SRR6168975 | leaf | none (control) | 12.47 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 12.72 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.84 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 9.67 | MC |
| SRR6168979 | leaf | none (control) | 2.70 | MC |
| SRR6168980 | leaf | none (control) | 0.88 | MC |
| SRR6168981 | leaf | none (control) | 4.17 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 6.13 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 7.96 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 6.73 | MC |
| SRR8582888 | panicle | AM | 15.61 | MC |
| SRR8582889 | panicle | AM | 4.09 | MC |
| SRR8582890 | panicle | AM | 8.23 | MC |
| SRR8582891 | panicle | PM | 35.58 | MC |
| SRR8582892 | panicle | PM | 40.48 | MC |
| SRR8582893 | panicle | PM | 27.04 | MC |
| SRR5110429 | panicle | Dawn | 6.00 | MC |
| SRR5110430 | panicle | Dawn | 14.07 | MC |
| SRR5110431 | panicle | Dawn | 4.92 | MC |
| SRR5110432 | panicle | Dawn | 12.37 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.17 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 5.36 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.44 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 8.62 | MC |
| SRR5110437 | panicle | Dawn + 7h | 4.96 | MC |
| SRR5110438 | panicle | Dawn + 7h | 6.24 | MC |
| SRR5110439 | panicle | Dawn + 7h | 7.64 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.76 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.59 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.96 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 5.93 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.04 | MC |
| SRR5110445 | panicle | Dusk | 5.79 | MC |
| SRR5110446 | panicle | Dusk | 5.85 | MC |
| SRR5110447 | panicle | Dusk | 8.02 | MC |
| SRR5110448 | panicle | Dusk | 14.76 | MC |
| SRR5110449 | panicle | Dawn + 14h | 11.61 | MC |
| SRR5110450 | panicle | Dawn + 14h | 15.89 | MC |
| SRR5110451 | panicle | Dawn + 14h | 5.97 | MC |
| SRR5110452 | panicle | Dawn + 14h | 12.32 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 10.26 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 14.08 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 14.86 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 12.59 | MC |
| SRR5110457 | panicle | Dawn + 21h | 8.69 | MC |
| SRR5110458 | panicle | Dawn + 21h | 12.46 | MC |
| SRR5110459 | panicle | Dawn + 21h | 10.28 | MC |
| SRR5110460 | panicle | Dawn + 21h | 13.85 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.37 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.77 | MC |
| SRR1213695 | root | wt | 0.71 | MC |
| SRR4947485 | root | Al | 0.67 | MC |
| SRR4947489 | root | control | 0.80 | MC |
| SRR4947501 | root | Al | 1.58 | MC |
| SRR4947507 | root | Al | 1.65 | MC |
| SRR6441554 | seedling | wild_type | 5.67 | MC |
| SRR6441555 | seedling | wild_type | 4.18 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.11 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.21 | MC |
| SRR1944583 | seedling | no_treatment | 11.03 | MC |
| SRR358791 | seedling | wt | 2.39 | MC |
| SRR358792 | seedling | wt | 1.93 | MC |
| SRR358793 | seedling | wt | 1.44 | MC |
| SRR358794 | seedling | wt | 1.35 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.25 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.53 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.82 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.96 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.55 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 5.11 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.84 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 6.56 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 5.11 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.07 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.97 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 5.66 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.95 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.48 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.41 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.19 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.02 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.17 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.08 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.10 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.75 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.51 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.21 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.31 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.74 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.74 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.16 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.05 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.81 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.14 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 11.11 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.54 | MC |