| SRR4457249 | 2nd_leaf | DAH4 | 1.63 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.50 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.75 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.79 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.77 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.59 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.93 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.33 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.96 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.86 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.53 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.34 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.88 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.93 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.79 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.80 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.93 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.58 | MC |
| SRR3745125 | anther | wt | 0.35 | MC |
| SRR3745126 | anther | wt | 2.08 | MC |
| SRR3745127 | anther | wt | 1.76 | MC |
| SRR358797 | callus | wt | 0.99 | MC |
| SRR358798 | callus | wt | 0.88 | MC |
| SRR5560727 | caryopsis | wild_type | 2.47 | MC |
| SRR5560728 | caryopsis | wild_type | 1.82 | MC |
| SRR5560729 | caryopsis | wild_type | 1.52 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.55 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.56 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.45 | MC |
| SRR4947495 | root | control | 2.23 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.56 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.55 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.99 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.56 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.10 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.80 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.36 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.17 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.53 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.80 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.07 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.61 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.41 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.06 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.83 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.86 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.62 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.06 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.12 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.68 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.94 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.79 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.00 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.23 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.63 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.27 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.89 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.85 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.14 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.38 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.06 | MC |
| SRR1213691 | flower | wt | 0.55 | MC |
| SRR8060835 | leaf | wild_type | 0.63 | MC |
| SRR8060836 | leaf | wild_type | 1.02 | MC |
| SRR8060837 | leaf | wild_type | 0.57 | MC |
| SRR8240824 | leaf | wild_type | 0.87 | MC |
| SRR8240825 | leaf | wild_type | 1.07 | MC |
| SRR8240826 | leaf | wild_type | 0.37 | MC |
| SRR8240818 | leaf | wild_type | 1.07 | MC |
| SRR8240819 | leaf | wild_type | 0.58 | MC |
| SRR8240820 | leaf | wild_type | 0.36 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.07 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.75 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.68 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.71 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.61 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.64 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.01 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.49 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.70 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.58 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.69 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.65 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.71 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.63 | MC |
| SRR1761529 | leaf | drought | 0.65 | MC |
| SRR1761530 | leaf | control | 0.62 | MC |
| SRR504365 | leaf | wt | 5.29 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.42 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.59 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR6417967 | leaf | H2O_control | 1.56 | MC |
| SRR6417968 | leaf | H2O_control | 0.43 | MC |
| SRR6417969 | leaf | H2O_control | 0.89 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.62 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.62 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.56 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.89 | MC |
| SRR1213692 | leaf | wt | 0.87 | MC |
| SRR1213693 | leaf | wt | 0.49 | MC |
| SRR6502089 | leaf | control | 0.63 | MC |
| SRR6502090 | leaf | control | 0.57 | MC |
| SRR5856927 | leaf | control | 8.34 | MC |
| SRR5856928 | leaf | control | 12.37 | MC |
| SRR5856930 | leaf | salt | 8.99 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.70 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.68 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.46 | MC |
| SRR8582888 | panicle | AM | 19.69 | MC |
| SRR8582889 | panicle | AM | 3.53 | MC |
| SRR8582890 | panicle | AM | 10.03 | MC |
| SRR5110429 | panicle | Dawn | 13.36 | MC |
| SRR5110431 | panicle | Dawn | 9.24 | MC |
| SRR4947496 | root | control | 0.86 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 6.96 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 6.98 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.80 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 17.74 | MC |
| SRR5110437 | panicle | Dawn + 7h | 8.85 | MC |
| SRR5110438 | panicle | Dawn + 7h | 10.66 | MC |
| SRR5110440 | panicle | Dawn + 7h | 5.82 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 7.62 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 7.95 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 9.41 | MC |
| SRR5110445 | panicle | Dusk | 11.17 | MC |
| SRR5110457 | panicle | Dawn + 21h | 15.32 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.74 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.35 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.60 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.71 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.80 | MC |
| SRR1213695 | root | wt | 0.54 | MC |
| SRR4947478 | root | control | 0.65 | MC |
| SRR4947479 | root | control | 1.26 | MC |
| SRR4947480 | root | control | 0.76 | MC |
| SRR4947481 | root | control | 1.56 | MC |
| SRR4947482 | root | Al | 3.06 | MC |
| SRR4947483 | root | Al | 1.42 | MC |
| SRR4947484 | root | Al | 1.47 | MC |
| SRR4947485 | root | Al | 1.30 | MC |
| SRR4947487 | root | control | 0.91 | MC |
| SRR4947488 | root | control | 0.82 | MC |
| SRR4947489 | root | control | 0.87 | MC |
| SRR4947490 | root | Al | 2.07 | MC |
| SRR4947491 | root | Al | 8.65 | MC |
| SRR4947492 | root | Al | 1.29 | MC |
| SRR4947493 | root | Al | 1.20 | MC |
| SRR4947494 | root | control | 1.26 | MC |
| SRR4947497 | root | control | 5.02 | MC |
| SRR4947498 | root | Al | 5.96 | MC |
| SRR4947499 | root | Al | 4.14 | MC |
| SRR4947500 | root | Al | 1.52 | MC |
| SRR4947501 | root | Al | 9.36 | MC |
| SRR4947502 | root | control | 6.79 | MC |
| SRR4947503 | root | control | 1.96 | MC |
| SRR4947504 | root | control | 1.34 | MC |
| SRR4947505 | root | control | 1.39 | MC |
| SRR4947506 | root | Al | 1.43 | MC |
| SRR4947507 | root | Al | 12.36 | MC |
| SRR4947508 | root | Al | 1.33 | MC |
| SRR4947509 | root | Al | 1.26 | MC |
| SRR6441555 | seedling | wild_type | 8.59 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.97 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.22 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.16 | MC |
| SRR358791 | seedling | wt | 3.23 | MC |
| SRR358792 | seedling | wt | 3.25 | MC |
| SRR358793 | seedling | wt | 3.67 | MC |
| SRR358794 | seedling | wt | 3.78 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.04 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 9.47 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 7.89 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 7.26 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 13.85 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 11.40 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 13.46 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 10.75 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 8.26 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 12.36 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.01 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.06 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.14 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.07 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.00 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.98 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.08 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.10 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.15 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.07 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.06 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.07 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.38 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.28 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.97 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.95 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.84 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.01 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.88 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.34 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.27 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.28 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.71 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.20 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.77 | MC |