| SRR4457249 | 2nd_leaf | DAH4 | 10.32 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 8.64 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 6.97 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 6.20 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 6.94 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.42 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 6.13 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 5.97 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 6.33 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 8.02 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 6.72 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 10.24 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 4.71 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.88 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 6.21 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 9.79 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 11.54 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 7.43 | MC |
| SRR358797 | callus | wt | 0.70 | MC |
| SRR5560727 | caryopsis | wild_type | 8.51 | MC |
| SRR5560728 | caryopsis | wild_type | 5.75 | MC |
| SRR5560729 | caryopsis | wild_type | 5.31 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.31 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.09 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.34 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.43 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.82 | MC |
| SRR976168 | flag_leaf | wild_type | 3.69 | MC |
| SRR4457231 | flag_leaf | DAH4 | 7.47 | MC |
| SRR4457232 | flag_leaf | DAH4 | 6.58 | MC |
| SRR4457233 | flag_leaf | DAH4 | 7.30 | MC |
| SRR4457234 | flag_leaf | DAH12 | 4.76 | MC |
| SRR4457235 | flag_leaf | DAH12 | 5.54 | MC |
| SRR4457236 | flag_leaf | DAH12 | 4.86 | MC |
| SRR4457237 | flag_leaf | DAH20 | 5.19 | MC |
| SRR4457238 | flag_leaf | DAH20 | 4.94 | MC |
| SRR4457239 | flag_leaf | DAH20 | 4.83 | MC |
| SRR4457240 | flag_leaf | DAH28 | 6.64 | MC |
| SRR4457241 | flag_leaf | DAH28 | 6.20 | MC |
| SRR4457242 | flag_leaf | DAH28 | 6.23 | MC |
| SRR4457243 | flag_leaf | DAH36 | 4.06 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.37 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.78 | MC |
| SRR4457246 | flag_leaf | DAH44 | 8.03 | MC |
| SRR4457247 | flag_leaf | DAH44 | 7.63 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.75 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.20 | MC |
| SRR1213691 | flower | wt | 2.29 | MC |
| SRR8240824 | leaf | wild_type | 7.55 | MC |
| SRR8240825 | leaf | wild_type | 11.05 | MC |
| SRR8240826 | leaf | wild_type | 7.24 | MC |
| SRR8240818 | leaf | wild_type | 5.97 | MC |
| SRR8240819 | leaf | wild_type | 8.42 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.92 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.89 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.88 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.17 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.90 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.25 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.01 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.40 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.42 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.49 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.19 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.40 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.44 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.12 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.42 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.50 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.32 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.73 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.38 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.12 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.91 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.12 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.36 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.48 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.97 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.20 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.29 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.38 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.45 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.80 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.21 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.10 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.70 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.67 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.25 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.46 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.87 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.90 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.71 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.90 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.71 | MC |
| SRR1761530 | leaf | control | 2.90 | MC |
| SRR1761531 | leaf | control | 1.71 | MC |
| SRR504365 | leaf | wt | 9.71 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.35 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.72 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.12 | MC |
| SRR6417967 | leaf | H2O_control | 2.95 | MC |
| SRR6417968 | leaf | H2O_control | 3.64 | MC |
| SRR6417969 | leaf | H2O_control | 4.62 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.63 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.83 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.67 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.17 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 3.16 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.13 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.68 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 5.80 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 5.02 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.11 | MC |
| SRR8611900 | leaf | Non-inoculated | 6.39 | MC |
| SRR8611901 | leaf | Non-inoculated | 6.69 | MC |
| SRR8611902 | leaf | Non-inoculated | 6.65 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.58 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.64 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.94 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.32 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.20 | MC |
| SRR1213692 | leaf | wt | 6.16 | MC |
| SRR1213693 | leaf | wt | 3.31 | MC |
| SRR6168973 | leaf | none (control) | 12.83 | MC |
| SRR6168974 | leaf | none (control) | 15.73 | MC |
| SRR6168975 | leaf | none (control) | 11.34 | MC |
| SRR6168979 | leaf | none (control) | 0.25 | MC |
| SRR6168980 | leaf | none (control) | 0.35 | MC |
| SRR6168981 | leaf | none (control) | 3.14 | MC |
| SRR8582888 | panicle | AM | 4.70 | MC |
| SRR8582889 | panicle | AM | 4.11 | MC |
| SRR8582890 | panicle | AM | 3.70 | MC |
| SRR8582891 | panicle | PM | 15.84 | MC |
| SRR8582892 | panicle | PM | 16.82 | MC |
| SRR8582893 | panicle | PM | 17.58 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.46 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.62 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.48 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.07 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.52 | MC |
| SRR5126153 | root | "mock,7_days" | 0.42 | MC |
| SRR5126155 | root | "mock,7_days" | 0.69 | MC |
| SRR5126157 | root | "mock,7_days" | 1.29 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.46 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.76 | MC |
| SRR5126167 | root | "mock,14_days" | 0.38 | MC |
| SRR5126169 | root | "mock,14_days" | 1.38 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.06 | MC |
| SRR1213694 | root | wt | 0.37 | MC |
| SRR1213695 | root | wt | 2.93 | MC |
| SRR6441554 | seedling | wild_type | 3.31 | MC |
| SRR6441555 | seedling | wild_type | 2.67 | MC |
| SRR2154086 | seedling | wt | 3.81 | MC |
| SRR2154085 | seedling | wt | 1.51 | MC |
| SRR2154087 | seedling | wt | 3.62 | MC |
| SRR3098741 | seedling | wt | 15.61 | MC |
| SRR3098742 | seedling | wt | 15.29 | MC |
| SRR3098743 | seedling | wt | 16.25 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.86 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.59 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.54 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.77 | MC |
| SRR1944583 | seedling | no_treatment | 3.27 | MC |
| SRR358791 | seedling | wt | 4.61 | MC |
| SRR358792 | seedling | wt | 4.59 | MC |
| SRR358793 | seedling | wt | 2.15 | MC |
| SRR358794 | seedling | wt | 2.54 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.95 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.95 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.18 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.99 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.38 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.04 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.95 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.16 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.19 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 5.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 4.16 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.03 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 5.31 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 5.21 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.62 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.83 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.40 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.89 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.81 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.03 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.46 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.70 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.50 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.16 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.39 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.74 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.52 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.83 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.83 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.29 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.49 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.86 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.18 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.84 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.69 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.79 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.15 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.93 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.70 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.94 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.05 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.83 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.26 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.70 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.38 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.39 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.66 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.66 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.51 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.46 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.05 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.24 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 2.52 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.96 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.98 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.15 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.91 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.46 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.97 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.05 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.21 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.82 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.22 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.82 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.88 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.07 | MC |