| SRR4457252 | 2nd_leaf | DAH12 | 2.57 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.59 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.80 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.90 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.93 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.44 | MC |
| SRR358798 | callus | wt | 1.17 | MC |
| SRR6320498 | carpel | wt | 1.27 | MC |
| SRR5560728 | caryopsis | wild_type | 2.11 | MC |
| SRR4947495 | root | control | 3.71 | MC |
| SRR7265411 | coleoptile | 3dN | 0.85 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.30 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.68 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.65 | MC |
| SRR7265378 | embryo | 1hA | 0.35 | MC |
| SRR7265385 | embryo | 3hN | 1.54 | MC |
| SRR7265390 | embryo | 12hA | 3.87 | MC |
| SRR7265398 | embryo | 24hN | 3.30 | MC |
| SRR2338869 | endosprem | high_temperature | 0.50 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.80 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.01 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.27 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.99 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.89 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.80 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.72 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.60 | MC |
| SRR8060837 | leaf | wild_type | 0.26 | MC |
| SRR8240825 | leaf | wild_type | 2.42 | MC |
| SRR8240826 | leaf | wild_type | 1.31 | MC |
| SRR8240818 | leaf | wild_type | 0.83 | MC |
| SRR8240820 | leaf | wild_type | 1.73 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.52 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.11 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.63 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.60 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.76 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.90 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.88 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.16 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.27 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.43 | MC |
| SRR1213693 | leaf | wt | 1.98 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.38 | MC |
| SRR6168975 | leaf | none (control) | 2.31 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.94 | MC |
| SRR4947496 | root | control | 3.25 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.84 | MC |
| SRR5126148 | root | "mock,1_day" | 0.53 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.56 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.09 | MC |
| SRR5126155 | root | "mock,7_days" | 3.17 | MC |
| SRR5126157 | root | "mock,7_days" | 3.21 | MC |
| SRR5126165 | root | "mock,14_days" | 2.44 | MC |
| SRR5126167 | root | "mock,14_days" | 3.89 | MC |
| SRR5126169 | root | "mock,14_days" | 3.05 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.81 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.51 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.14 | MC |
| SRR4947489 | root | control | 3.17 | MC |
| SRR4947497 | root | control | 3.19 | MC |
| SRR4947499 | root | Al | 2.42 | MC |
| SRR3098741 | seedling | wt | 1.52 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.20 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.81 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.33 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.29 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.49 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 7.03 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 8.41 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.28 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.75 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.09 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.27 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 3.02 | MC |