| SRR4457256 | 2nd_leaf | DAH20 | 3.87 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.96 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.81 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.44 | MC |
| SRR3745125 | anther | wt | 1.17 | MC |
| SRR4947495 | root | control | 4.41 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.44 | MC |
| SRR7265406 | coleoptile | 3dA | 2.73 | MC |
| SRR7265407 | coleoptile | 3dA | 2.35 | MC |
| SRR7265408 | coleoptile | 3dA | 1.54 | MC |
| SRR7265412 | coleoptile | 4dA | 2.93 | MC |
| SRR7265413 | coleoptile | 4dA | 5.13 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.29 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 4.11 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.10 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.94 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.24 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.26 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.33 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.59 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.37 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.95 | MC |
| SRR2338867 | endosprem | control | 1.01 | MC |
| SRR976168 | flag_leaf | wild_type | 0.40 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.06 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.17 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.90 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.94 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.36 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.35 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.90 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.21 | MC |
| SRR8240824 | leaf | wild_type | 0.86 | MC |
| SRR8240825 | leaf | wild_type | 0.58 | MC |
| SRR8240826 | leaf | wild_type | 1.94 | MC |
| SRR8240818 | leaf | wild_type | 0.69 | MC |
| SRR8240819 | leaf | wild_type | 0.53 | MC |
| SRR8240820 | leaf | wild_type | 0.91 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.46 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.64 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.97 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.31 | MC |
| SRR6417969 | leaf | H2O_control | 1.56 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.26 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.51 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.57 | MC |
| SRR5856927 | leaf | control | 2.25 | MC |
| SRR5856929 | leaf | control | 2.09 | MC |
| SRR5856931 | leaf | salt | 1.71 | MC |
| SRR5856932 | leaf | salt | 1.52 | MC |
| SRR5856933 | leaf | control | 2.43 | MC |
| SRR5856934 | leaf | control | 1.88 | MC |
| SRR5856936 | leaf | salt | 1.69 | MC |
| SRR5856937 | leaf | salt | 1.60 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.48 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.94 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.80 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.17 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 6.44 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.36 | MC |
| SRR6168974 | leaf | none (control) | 3.08 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.28 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.70 | MC |
| SRR6168979 | leaf | none (control) | 1.45 | MC |
| SRR4947496 | root | control | 4.61 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.65 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.05 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.98 | MC |
| SRR5110439 | panicle | Dawn + 7h | 5.06 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.28 | MC |
| SRR5110449 | panicle | Dawn + 14h | 5.62 | MC |
| SRR5110450 | panicle | Dawn + 14h | 4.30 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.55 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.27 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.77 | MC |
| SRR5110458 | panicle | Dawn + 21h | 3.15 | MC |
| SRR1633182 | panicle | WT | 1.19 | MC |
| SRR1633185 | panicle | WT | 1.82 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.61 | MC |
| SRR4947478 | root | control | 3.72 | MC |
| SRR4947479 | root | control | 3.44 | MC |
| SRR4947482 | root | Al | 1.49 | MC |
| SRR4947483 | root | Al | 2.64 | MC |
| SRR4947484 | root | Al | 4.87 | MC |
| SRR4947485 | root | Al | 3.62 | MC |
| SRR4947488 | root | control | 3.91 | MC |
| SRR4947489 | root | control | 4.16 | MC |
| SRR4947490 | root | Al | 3.61 | MC |
| SRR4947492 | root | Al | 5.38 | MC |
| SRR4947498 | root | Al | 4.57 | MC |
| SRR4947500 | root | Al | 4.65 | MC |
| SRR4947504 | root | control | 5.07 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.64 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.72 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.38 | MC |
| SRR1740431 | root_elongation_zone | wt | 2.95 | MC |
| SRR6441554 | seedling | wild_type | 3.11 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.30 | MC |
| SRR1944583 | seedling | no_treatment | 3.32 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.09 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.12 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.29 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.79 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.44 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.09 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.38 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.54 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.70 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.91 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.36 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.85 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.16 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.89 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.88 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.04 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.71 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 6.09 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 3.29 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 6.00 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.31 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.24 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.19 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.81 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.71 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 4.66 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.46 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.59 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.69 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.96 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 7.12 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.28 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 4.42 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.62 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.15 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.34 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.72 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.60 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.75 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.57 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.47 | MC |