| SRR4457249 | 2nd_leaf | DAH4 | 0.88 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.56 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.92 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.03 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.12 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.85 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.76 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.01 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.08 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.53 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.74 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.96 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.57 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.89 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.09 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.75 | MC |
| SRR5560727 | caryopsis | wild_type | 0.45 | MC |
| SRR7265401 | coleoptile | 2dA | 0.44 | MC |
| SRR7265403 | coleoptile | 2dN | 1.04 | MC |
| SRR7265406 | coleoptile | 3dA | 0.41 | MC |
| SRR7265407 | coleoptile | 3dA | 0.27 | MC |
| SRR7265408 | coleoptile | 3dA | 0.39 | MC |
| SRR7265409 | coleoptile | 3dN | 0.54 | MC |
| SRR7265410 | coleoptile | 3dN | 0.77 | MC |
| SRR7265411 | coleoptile | 3dN | 0.52 | MC |
| SRR7265414 | coleoptile | 4dA | 1.49 | MC |
| SRR7265416 | coleoptile | 4dN | 3.03 | MC |
| SRR7265417 | coleoptile | 4dN | 2.18 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.02 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.03 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.99 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.45 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.84 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.99 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.91 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.90 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.71 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.34 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.35 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.54 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.78 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.80 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.73 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.60 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.44 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.58 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.66 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.44 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.95 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.96 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.64 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.75 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.50 | MC |
| SRR504365 | leaf | wt | 0.52 | MC |
| SRR6417969 | leaf | H2O_control | 0.62 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.68 | MC |
| SRR5856933 | leaf | control | 0.29 | MC |
| SRR5856934 | leaf | control | 0.21 | MC |
| SRR5856935 | leaf | control | 1.33 | MC |
| SRR5856936 | leaf | salt | 0.54 | MC |
| SRR5856937 | leaf | salt | 0.46 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.58 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.80 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.03 | MC |
| SRR5110429 | panicle | Dawn | 1.76 | MC |
| SRR5110430 | panicle | Dawn | 2.62 | MC |
| SRR5110431 | panicle | Dawn | 2.41 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.63 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.25 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.65 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.85 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.53 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.76 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.90 | MC |
| SRR5110445 | panicle | Dusk | 2.75 | MC |
| SRR5110447 | panicle | Dusk | 1.29 | MC |
| SRR5110449 | panicle | Dawn + 14h | 6.11 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.50 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.22 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.24 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.39 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.65 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.01 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.99 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.13 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.28 | MC |
| SRR5126153 | root | "mock,7_days" | 0.45 | MC |
| SRR5126155 | root | "mock,7_days" | 0.36 | MC |
| SRR5126157 | root | "mock,7_days" | 0.51 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.40 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.56 | MC |
| SRR5126169 | root | "mock,14_days" | 0.41 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.54 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.29 | MC |
| SRR4947480 | root | control | 0.82 | MC |
| SRR4947481 | root | control | 0.65 | MC |
| SRR4947489 | root | control | 0.72 | MC |
| SRR4947500 | root | Al | 0.73 | MC |
| SRR4947509 | root | Al | 1.16 | MC |
| SRR2154086 | seedling | wt | 0.83 | MC |
| SRR2154082 | seedling | wt | 1.41 | MC |
| SRR2154083 | seedling | wt | 1.55 | MC |
| SRR2154084 | seedling | wt | 1.00 | MC |
| SRR2154085 | seedling | wt | 0.53 | MC |
| SRR2154087 | seedling | wt | 0.87 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.58 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.79 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.14 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.05 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.71 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.23 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.14 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.38 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.17 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.64 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.45 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.67 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.62 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.55 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.67 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.07 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.83 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.51 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.55 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.73 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.13 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.99 | MC |