| SRR4457250 | 2nd_leaf | DAH4 | 0.60 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.66 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.82 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.70 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.50 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.20 | MC |
| SRR976168 | flag_leaf | wild_type | 0.68 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.43 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.38 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.25 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.73 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.36 | MC |
| SRR8060835 | leaf | wild_type | 1.13 | MC |
| SRR8060836 | leaf | wild_type | 3.17 | MC |
| SRR8060837 | leaf | wild_type | 1.95 | MC |
| SRR8240819 | leaf | wild_type | 0.22 | MC |
| SRR8240820 | leaf | wild_type | 0.27 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.60 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.49 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.61 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.06 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.70 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.83 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.00 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.43 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.76 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.06 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.69 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.39 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.09 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.77 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.09 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.77 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.51 | MC |
| SRR1761528 | leaf | drought | 1.09 | MC |
| SRR1761530 | leaf | control | 0.77 | MC |
| SRR1761531 | leaf | control | 0.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.72 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.32 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.38 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.32 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.27 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.33 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.07 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.59 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.30 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.54 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR1213692 | leaf | wt | 1.29 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.12 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.37 | MC |
| SRR6502088 | leaf | control | 0.31 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.43 | MC |
| SRR6502100 | leaf | control | 0.37 | MC |
| SRR6502101 | leaf | control | 0.50 | MC |
| SRR5856928 | leaf | control | 0.23 | MC |
| SRR5110432 | panicle | Dawn | 1.13 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.14 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.45 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.29 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.76 | MC |
| SRR5110448 | panicle | Dusk | 0.48 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.86 | MC |
| SRR5126149 | root | "mock,1_day" | 1.46 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.85 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.37 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.61 | MC |
| SRR5126153 | root | "mock,7_days" | 0.88 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.51 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.47 | MC |
| SRR5126165 | root | "mock,14_days" | 0.46 | MC |
| SRR5126167 | root | "mock,14_days" | 0.78 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.49 | MC |
| SRR1213694 | root | wt | 0.39 | MC |
| SRR2154086 | seedling | wt | 0.76 | MC |
| SRR2154083 | seedling | wt | 0.58 | MC |
| SRR2154085 | seedling | wt | 2.94 | MC |
| SRR3098741 | seedling | wt | 0.55 | MC |
| SRR3098743 | seedling | wt | 0.24 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.39 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.35 | MC |
| SRR1944583 | seedling | no_treatment | 0.42 | MC |
| SRR358794 | seedling | wt | 0.53 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.93 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.65 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.69 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.74 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.31 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.85 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.42 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.30 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.42 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.53 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.66 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.56 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.10 | MC |