| SRR5560727 | caryopsis | wild_type | 0.48 | MC |
| SRR5560729 | caryopsis | wild_type | 0.42 | MC |
| SRR4947495 | root | control | 0.62 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.14 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.87 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.21 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.57 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.23 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.99 | MC |
| SRR8060835 | leaf | wild_type | 2.22 | MC |
| SRR8060837 | leaf | wild_type | 1.76 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.35 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.69 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.24 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.03 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.59 | MC |
| SRR6168980 | leaf | none (control) | 0.35 | MC |
| SRR6168981 | leaf | none (control) | 0.38 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.89 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.87 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.50 | MC |
| SRR8582889 | panicle | AM | 0.22 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.74 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.45 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.57 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.05 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.50 | MC |
| SRR5126147 | root | "mock,1_day" | 0.35 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.58 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.56 | MC |
| SRR5126155 | root | "mock,7_days" | 0.37 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.04 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.17 | MC |
| SRR5126169 | root | "mock,14_days" | 0.56 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.28 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.23 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.78 | MC |
| SRR4947487 | root | control | 0.50 | MC |
| SRR4947498 | root | Al | 0.57 | MC |
| SRR4947499 | root | Al | 0.63 | MC |
| SRR4947506 | root | Al | 1.34 | MC |
| SRR4947507 | root | Al | 1.39 | MC |
| SRR6441554 | seedling | wild_type | 0.23 | MC |
| SRR3098742 | seedling | wt | 0.29 | MC |
| SRR3098743 | seedling | wt | 0.44 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.13 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.69 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.64 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.34 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.29 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.25 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.44 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.50 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.57 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.56 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.28 | MC |