| SRR4457255 | 2nd_leaf | DAH20 | 0.84 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.29 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.53 | MC |
| SRR358795 | callus | wt | 1.86 | MC |
| SRR358797 | callus | wt | 0.90 | MC |
| SRR358798 | callus | wt | 1.63 | MC |
| SRR6320473 | carpel | wt | 1.15 | MC |
| SRR5560727 | caryopsis | wild_type | 0.52 | MC |
| SRR5560728 | caryopsis | wild_type | 1.03 | MC |
| SRR5560729 | caryopsis | wild_type | 1.65 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.62 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.81 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.45 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.96 | MC |
| SRR7265400 | coleoptile | 2dA | 0.29 | MC |
| SRR7265412 | coleoptile | 4dA | 1.52 | MC |
| SRR7265413 | coleoptile | 4dA | 1.58 | MC |
| SRR7265414 | coleoptile | 4dA | 1.99 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.42 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.74 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.60 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.17 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.38 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.75 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.21 | MC |
| SRR2338867 | endosprem | control | 0.70 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.22 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.64 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.38 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.40 | MC |
| SRR8060835 | leaf | wild_type | 0.68 | MC |
| SRR8060836 | leaf | wild_type | 0.29 | MC |
| SRR8060837 | leaf | wild_type | 0.41 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.72 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.47 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.83 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.01 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.47 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.61 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.44 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.41 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.31 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.33 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.57 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.34 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.99 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.53 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.40 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.31 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.66 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.61 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.57 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.66 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.61 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.57 | MC |
| SRR1761528 | leaf | drought | 0.66 | MC |
| SRR1761530 | leaf | control | 0.61 | MC |
| SRR1761531 | leaf | control | 0.57 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.29 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.49 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.03 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.22 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.71 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.67 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.41 | MC |
| SRR1213692 | leaf | wt | 0.49 | MC |
| SRR1213693 | leaf | wt | 0.39 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.62 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.84 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.81 | MC |
| SRR6502101 | leaf | control | 0.41 | MC |
| SRR5856929 | leaf | control | 0.41 | MC |
| SRR5856930 | leaf | salt | 0.56 | MC |
| SRR5856931 | leaf | salt | 0.44 | MC |
| SRR5856932 | leaf | salt | 0.19 | MC |
| SRR5856933 | leaf | control | 0.62 | MC |
| SRR5856934 | leaf | control | 0.49 | MC |
| SRR5856935 | leaf | control | 0.52 | MC |
| SRR5856936 | leaf | salt | 0.27 | MC |
| SRR5856937 | leaf | salt | 0.29 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.78 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.34 | MC |
| SRR6168973 | leaf | none (control) | 0.46 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.48 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.53 | MC |
| SRR6168979 | leaf | none (control) | 0.20 | MC |
| SRR6168980 | leaf | none (control) | 0.37 | MC |
| SRR6168981 | leaf | none (control) | 0.54 | MC |
| SRR5110429 | panicle | Dawn | 0.63 | MC |
| SRR5110430 | panicle | Dawn | 0.57 | MC |
| SRR5110431 | panicle | Dawn | 0.98 | MC |
| SRR5110432 | panicle | Dawn | 0.57 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.71 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.12 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.53 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.13 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.98 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.28 | MC |
| SRR5110446 | panicle | Dusk | 2.00 | MC |
| SRR5110447 | panicle | Dusk | 2.81 | MC |
| SRR5110448 | panicle | Dusk | 1.34 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.00 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.90 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.51 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.98 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.40 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.07 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.28 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.47 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.96 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.42 | MC |
| SRR1633182 | panicle | WT | 1.32 | MC |
| SRR1633185 | panicle | WT | 2.72 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.68 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.72 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.98 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.67 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 3.47 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.35 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.33 | MC |
| SRR1213695 | root | wt | 0.51 | MC |
| SRR4947478 | root | control | 2.56 | MC |
| SRR4947479 | root | control | 4.18 | MC |
| SRR4947482 | root | Al | 2.94 | MC |
| SRR4947487 | root | control | 2.71 | MC |
| SRR4947503 | root | control | 3.75 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.72 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.04 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.13 | MC |
| SRR6502094 | root | control | 2.47 | MC |
| SRR6502095 | root | control | 3.44 | MC |
| SRR6502096 | root | control | 1.72 | MC |
| SRR6502106 | root | control | 2.65 | MC |
| SRR6502107 | root | control | 4.00 | MC |
| SRR6502108 | root | control | 2.43 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.44 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.04 | MC |
| SRR6441555 | seedling | wild_type | 2.21 | MC |
| SRR2154086 | seedling | wt | 4.09 | MC |
| SRR2154082 | seedling | wt | 1.18 | MC |
| SRR2154083 | seedling | wt | 1.18 | MC |
| SRR2154084 | seedling | wt | 0.78 | MC |
| SRR2154085 | seedling | wt | 3.81 | MC |
| SRR2154087 | seedling | wt | 3.76 | MC |
| SRR3098741 | seedling | wt | 0.30 | MC |
| SRR3098742 | seedling | wt | 1.12 | MC |
| SRR3098743 | seedling | wt | 1.19 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.12 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.16 | MC |
| SRR1944583 | seedling | no_treatment | 3.77 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.68 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.69 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.30 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.63 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.55 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.23 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.42 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.30 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.71 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.67 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.18 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.26 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.17 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.56 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.12 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.09 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.70 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.91 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.69 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.08 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.69 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.08 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.20 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.21 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.15 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.76 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.65 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.55 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.16 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.48 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.84 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.43 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.35 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.73 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.84 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.84 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.37 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.82 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.62 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.56 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.78 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.96 | MC |