| SRR358796 | callus | wt | 1.31 | MC |
| SRR358798 | callus | wt | 0.98 | MC |
| SRR6320473 | carpel | wt | 2.42 | MC |
| SRR6320498 | carpel | wt | 2.86 | MC |
| SRR5560727 | caryopsis | wild_type | 1.80 | MC |
| SRR5560728 | caryopsis | wild_type | 0.70 | MC |
| SRR5560729 | caryopsis | wild_type | 0.65 | MC |
| SRR4947495 | root | control | 2.08 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.48 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.88 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.52 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.19 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.80 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.87 | MC |
| SRR8060836 | leaf | wild_type | 0.41 | MC |
| SRR8060837 | leaf | wild_type | 0.32 | MC |
| SRR504365 | leaf | wt | 0.23 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.20 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.58 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.49 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.95 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.22 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.22 | MC |
| SRR5856928 | leaf | control | 1.81 | MC |
| SRR5856930 | leaf | salt | 1.33 | MC |
| SRR5856931 | leaf | salt | 1.68 | MC |
| SRR5856932 | leaf | salt | 1.03 | MC |
| SRR5856933 | leaf | control | 1.86 | MC |
| SRR5856934 | leaf | control | 1.74 | MC |
| SRR5856935 | leaf | control | 1.53 | MC |
| SRR5856936 | leaf | salt | 1.26 | MC |
| SRR5856937 | leaf | salt | 0.52 | MC |
| SRR5856938 | leaf | salt | 0.74 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.94 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 6.34 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.83 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 5.24 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.91 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.13 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.94 | MC |
| SRR6168979 | leaf | none (control) | 0.25 | MC |
| SRR6168981 | leaf | none (control) | 1.35 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.83 | MC |
| SRR8582893 | panicle | PM | 0.35 | MC |
| SRR4947496 | root | control | 3.75 | MC |
| SRR1633182 | panicle | WT | 0.35 | MC |
| SRR1633185 | panicle | WT | 1.52 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.42 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.02 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.34 | MC |
| SRR4947478 | root | control | 1.27 | MC |
| SRR4947479 | root | control | 3.74 | MC |
| SRR4947480 | root | control | 3.44 | MC |
| SRR4947481 | root | control | 4.09 | MC |
| SRR4947482 | root | Al | 2.05 | MC |
| SRR4947483 | root | Al | 2.43 | MC |
| SRR4947484 | root | Al | 3.75 | MC |
| SRR4947485 | root | Al | 3.90 | MC |
| SRR4947487 | root | control | 1.85 | MC |
| SRR4947488 | root | control | 4.49 | MC |
| SRR4947489 | root | control | 3.60 | MC |
| SRR4947490 | root | Al | 0.55 | MC |
| SRR4947492 | root | Al | 3.55 | MC |
| SRR4947493 | root | Al | 3.19 | MC |
| SRR4947494 | root | control | 1.22 | MC |
| SRR4947497 | root | control | 5.33 | MC |
| SRR4947498 | root | Al | 3.81 | MC |
| SRR4947499 | root | Al | 3.33 | MC |
| SRR4947500 | root | Al | 2.36 | MC |
| SRR4947501 | root | Al | 5.37 | MC |
| SRR4947502 | root | control | 3.42 | MC |
| SRR4947503 | root | control | 2.72 | MC |
| SRR4947504 | root | control | 2.95 | MC |
| SRR4947505 | root | control | 3.01 | MC |
| SRR4947506 | root | Al | 2.11 | MC |
| SRR4947507 | root | Al | 4.40 | MC |
| SRR4947508 | root | Al | 3.64 | MC |
| SRR4947509 | root | Al | 2.24 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.33 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.53 | MC |
| SRR2154082 | seedling | wt | 1.38 | MC |
| SRR2154083 | seedling | wt | 2.16 | MC |
| SRR2154084 | seedling | wt | 2.27 | MC |
| SRR2154085 | seedling | wt | 2.13 | MC |
| SRR3098741 | seedling | wt | 0.26 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.19 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.58 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.17 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.42 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.13 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.08 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.11 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.90 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.46 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.23 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.28 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.19 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.26 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.44 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.42 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.33 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.07 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.32 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.36 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.09 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.78 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.92 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.25 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.02 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.18 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.98 | MC |