| SRR4457249 | 2nd_leaf | DAH4 | 3.88 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.44 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.56 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.24 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.95 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.40 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.52 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 4.47 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.30 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.07 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 4.65 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.26 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.87 | MC |
| SRR3745125 | anther | wt | 0.81 | MC |
| SRR3745126 | anther | wt | 0.60 | MC |
| SRR3745127 | anther | wt | 0.86 | MC |
| SRR358795 | callus | wt | 8.69 | MC |
| SRR358796 | callus | wt | 6.55 | MC |
| SRR358797 | callus | wt | 7.46 | MC |
| SRR6320473 | carpel | wt | 5.84 | MC |
| SRR6320498 | carpel | wt | 4.33 | MC |
| SRR5560727 | caryopsis | wild_type | 2.96 | MC |
| SRR5560728 | caryopsis | wild_type | 2.97 | MC |
| SRR5560729 | caryopsis | wild_type | 3.17 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.26 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.30 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.57 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.64 | MC |
| SRR7265400 | coleoptile | 2dA | 1.60 | MC |
| SRR7265401 | coleoptile | 2dA | 1.35 | MC |
| SRR7265402 | coleoptile | 2dA | 1.79 | MC |
| SRR7265403 | coleoptile | 2dN | 1.21 | MC |
| SRR7265404 | coleoptile | 2dN | 1.18 | MC |
| SRR7265405 | coleoptile | 2dN | 1.03 | MC |
| SRR7265406 | coleoptile | 3dA | 0.73 | MC |
| SRR7265407 | coleoptile | 3dA | 0.84 | MC |
| SRR7265408 | coleoptile | 3dA | 0.56 | MC |
| SRR7265409 | coleoptile | 3dN | 0.97 | MC |
| SRR7265410 | coleoptile | 3dN | 0.81 | MC |
| SRR7265411 | coleoptile | 3dN | 0.91 | MC |
| SRR7265412 | coleoptile | 4dA | 0.71 | MC |
| SRR7265413 | coleoptile | 4dA | 1.10 | MC |
| SRR7265414 | coleoptile | 4dA | 1.21 | MC |
| SRR7265415 | coleoptile | 4dN | 0.74 | MC |
| SRR7265416 | coleoptile | 4dN | 0.98 | MC |
| SRR7265417 | coleoptile | 4dN | 0.99 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.03 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.00 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.09 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.27 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.32 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.06 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.63 | MC |
| SRR7265376 | embryo | 1hA | 2.33 | MC |
| SRR7265377 | embryo | 1hA | 2.48 | MC |
| SRR7265380 | embryo | 1hN | 2.81 | MC |
| SRR7265382 | embryo | 3hA | 2.10 | MC |
| SRR7265383 | embryo | 3hA | 2.39 | MC |
| SRR7265384 | embryo | 3hA | 1.94 | MC |
| SRR7265385 | embryo | 3hN | 2.42 | MC |
| SRR7265386 | embryo | 3hN | 2.14 | MC |
| SRR7265387 | embryo | 3hN | 2.17 | MC |
| SRR7265388 | embryo | 12hA | 1.75 | MC |
| SRR7265389 | embryo | 12hA | 2.03 | MC |
| SRR7265390 | embryo | 12hA | 1.81 | MC |
| SRR7265391 | embryo | 12hN | 1.57 | MC |
| SRR7265392 | embryo | 12hN | 1.52 | MC |
| SRR7265393 | embryo | 12hN | 1.81 | MC |
| SRR7265394 | embryo | 24hA | 1.84 | MC |
| SRR7265395 | embryo | 24hA | 1.84 | MC |
| SRR7265396 | embryo | 24hA | 2.06 | MC |
| SRR7265397 | embryo | 24hN | 2.05 | MC |
| SRR7265398 | embryo | 24hN | 1.57 | MC |
| SRR7265399 | embryo | 24hN | 1.93 | MC |
| SRR2338866 | endosprem | control | 2.78 | MC |
| SRR2338867 | endosprem | control | 0.69 | MC |
| SRR2338868 | endosprem | high_temperature | 1.17 | MC |
| SRR2338869 | endosprem | high_temperature | 1.69 | MC |
| SRR976168 | flag_leaf | wild_type | 1.97 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.49 | MC |
| SRR4457233 | flag_leaf | DAH4 | 3.03 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.43 | MC |
| SRR4457235 | flag_leaf | DAH12 | 2.46 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.77 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.71 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.97 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.81 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.26 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.86 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.55 | MC |
| SRR4457243 | flag_leaf | DAH36 | 4.11 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.55 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.29 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.65 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.08 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.08 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.22 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.29 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.70 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.81 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.40 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.20 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.96 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.02 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.92 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.44 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.91 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.75 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.82 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.50 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.44 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.51 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.78 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.14 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.01 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.82 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.75 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.42 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.23 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.71 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.54 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.34 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.95 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.62 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.71 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.11 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.71 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.87 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.23 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.33 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.17 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.00 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.55 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.76 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.17 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.00 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.55 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.76 | MC |
| SRR1761528 | leaf | drought | 5.17 | MC |
| SRR1761529 | leaf | drought | 4.00 | MC |
| SRR1761530 | leaf | control | 4.55 | MC |
| SRR1761531 | leaf | control | 2.76 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.83 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.43 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.63 | MC |
| SRR6417967 | leaf | H2O_control | 0.62 | MC |
| SRR6417968 | leaf | H2O_control | 3.01 | MC |
| SRR6417969 | leaf | H2O_control | 0.62 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.69 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.36 | MC |
| SRR6502089 | leaf | control | 4.24 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.22 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 3.86 | MC |
| SRR6502101 | leaf | control | 4.28 | MC |
| SRR6502102 | leaf | control | 3.73 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.28 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.08 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.37 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.84 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.27 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 5.45 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.45 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.40 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.78 | MC |
| SRR6168973 | leaf | none (control) | 3.97 | MC |
| SRR6168974 | leaf | none (control) | 3.60 | MC |
| SRR6168975 | leaf | none (control) | 3.31 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.02 | MC |
| SRR6168980 | leaf | none (control) | 1.02 | MC |
| SRR6168981 | leaf | none (control) | 1.03 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.64 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.63 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.45 | MC |
| SRR8582888 | panicle | AM | 1.70 | MC |
| SRR8582889 | panicle | AM | 1.11 | MC |
| SRR8582890 | panicle | AM | 1.55 | MC |
| SRR8582891 | panicle | PM | 3.43 | MC |
| SRR8582892 | panicle | PM | 3.30 | MC |
| SRR8582893 | panicle | PM | 4.41 | MC |
| SRR5110429 | panicle | Dawn | 4.82 | MC |
| SRR5110430 | panicle | Dawn | 4.36 | MC |
| SRR5110431 | panicle | Dawn | 3.71 | MC |
| SRR4947496 | root | control | 4.20 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.69 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.73 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.68 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.74 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.22 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.56 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.33 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.92 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.50 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.13 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.57 | MC |
| SRR5110445 | panicle | Dusk | 2.58 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.55 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.17 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.18 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.36 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.89 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.83 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.73 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.20 | MC |
| SRR5126149 | root | "mock,1_day" | 3.68 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 4.32 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.57 | MC |
| SRR4947478 | root | control | 4.32 | MC |
| SRR4947480 | root | control | 1.69 | MC |
| SRR4947481 | root | control | 3.66 | MC |
| SRR4947483 | root | Al | 3.03 | MC |
| SRR4947484 | root | Al | 4.15 | MC |
| SRR4947485 | root | Al | 4.21 | MC |
| SRR4947488 | root | control | 2.69 | MC |
| SRR4947489 | root | control | 2.64 | MC |
| SRR4947490 | root | Al | 4.26 | MC |
| SRR4947491 | root | Al | 4.36 | MC |
| SRR4947492 | root | Al | 1.93 | MC |
| SRR4947493 | root | Al | 2.00 | MC |
| SRR4947497 | root | control | 3.38 | MC |
| SRR4947500 | root | Al | 3.69 | MC |
| SRR4947501 | root | Al | 3.46 | MC |
| SRR4947502 | root | control | 5.27 | MC |
| SRR4947504 | root | control | 3.62 | MC |
| SRR4947505 | root | control | 2.07 | MC |
| SRR4947508 | root | Al | 2.44 | MC |
| SRR4947509 | root | Al | 3.16 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.86 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.92 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.55 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.14 | MC |
| SRR2154085 | seedling | wt | 3.86 | MC |
| SRR3098742 | seedling | wt | 2.44 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.61 | MC |
| SRR358791 | seedling | wt | 6.88 | MC |
| SRR358793 | seedling | wt | 6.40 | MC |
| SRR358794 | seedling | wt | 5.29 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.14 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.37 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.54 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.44 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.85 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.05 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.19 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.74 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.80 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.18 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.34 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.87 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.89 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.12 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.12 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.73 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.74 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.22 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.49 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.19 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.01 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.45 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 9.13 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 6.83 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 7.48 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 6.59 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 7.01 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 7.73 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 8.56 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 7.55 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 8.85 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 9.28 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.42 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.75 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 5.48 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.74 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.18 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.48 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.21 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.17 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.60 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.51 | MC |