| SRR4457249 | 2nd_leaf | DAH4 | 3.81 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.71 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.12 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.48 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.56 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.93 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.70 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.57 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.74 | MC |
| SRR5560727 | caryopsis | wild_type | 2.99 | MC |
| SRR5560728 | caryopsis | wild_type | 5.25 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.50 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.32 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.67 | MC |
| SRR4947495 | root | control | 3.75 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.00 | MC |
| SRR7265405 | coleoptile | 2dN | 3.44 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.82 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.51 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.52 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.21 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.45 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.14 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.72 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.34 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.07 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.21 | MC |
| SRR7265376 | embryo | 1hA | 2.70 | MC |
| SRR7265377 | embryo | 1hA | 2.04 | MC |
| SRR7265378 | embryo | 1hA | 2.06 | MC |
| SRR7265379 | embryo | 1hN | 3.25 | MC |
| SRR7265380 | embryo | 1hN | 2.52 | MC |
| SRR7265381 | embryo | 1hN | 2.35 | MC |
| SRR7265382 | embryo | 3hA | 2.40 | MC |
| SRR7265383 | embryo | 3hA | 2.54 | MC |
| SRR7265384 | embryo | 3hA | 3.54 | MC |
| SRR7265386 | embryo | 3hN | 1.58 | MC |
| SRR7265387 | embryo | 3hN | 2.87 | MC |
| SRR7265388 | embryo | 12hA | 3.10 | MC |
| SRR7265389 | embryo | 12hA | 3.47 | MC |
| SRR7265390 | embryo | 12hA | 2.76 | MC |
| SRR7265391 | embryo | 12hN | 1.27 | MC |
| SRR7265392 | embryo | 12hN | 1.66 | MC |
| SRR7265393 | embryo | 12hN | 1.86 | MC |
| SRR7265395 | embryo | 24hA | 3.39 | MC |
| SRR7265396 | embryo | 24hA | 4.44 | MC |
| SRR7265397 | embryo | 24hN | 3.54 | MC |
| SRR7265398 | embryo | 24hN | 2.60 | MC |
| SRR7265399 | embryo | 24hN | 3.93 | MC |
| SRR2338866 | endosprem | control | 1.33 | MC |
| SRR2338867 | endosprem | control | 1.68 | MC |
| SRR2338869 | endosprem | high_temperature | 1.58 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.19 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.69 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.85 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.30 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.16 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.32 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.81 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.02 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.96 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.77 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.05 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.63 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.67 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.53 | MC |
| SRR4457248 | flag_leaf | DAH44 | 6.28 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.50 | MC |
| SRR1213691 | flower | wt | 2.46 | MC |
| SRR8060835 | leaf | wild_type | 0.81 | MC |
| SRR8060836 | leaf | wild_type | 2.27 | MC |
| SRR8060837 | leaf | wild_type | 0.84 | MC |
| SRR8240825 | leaf | wild_type | 0.52 | MC |
| SRR8240818 | leaf | wild_type | 0.58 | MC |
| SRR8240819 | leaf | wild_type | 0.54 | MC |
| SRR8240820 | leaf | wild_type | 0.26 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.36 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.66 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.05 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.72 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.38 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.25 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.94 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.84 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.60 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.00 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.72 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.30 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.20 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.01 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.07 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.32 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.06 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.78 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.26 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.06 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.30 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.29 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.16 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.51 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.92 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.34 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.10 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.65 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.25 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.56 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.28 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.52 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.19 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.82 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.52 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.19 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.82 | MC |
| SRR1761529 | leaf | drought | 2.52 | MC |
| SRR1761530 | leaf | control | 3.19 | MC |
| SRR1761531 | leaf | control | 2.82 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.54 | MC |
| SRR6417968 | leaf | H2O_control | 0.75 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.10 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.94 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.82 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.92 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.62 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.82 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.54 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.19 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.27 | MC |
| SRR1213692 | leaf | wt | 1.16 | MC |
| SRR1213693 | leaf | wt | 1.26 | MC |
| SRR6502088 | leaf | control | 1.52 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.78 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.79 | MC |
| SRR6502102 | leaf | control | 3.18 | MC |
| SRR5856927 | leaf | control | 1.51 | MC |
| SRR5856928 | leaf | control | 1.48 | MC |
| SRR5856929 | leaf | control | 0.93 | MC |
| SRR5856930 | leaf | salt | 0.56 | MC |
| SRR5856931 | leaf | salt | 1.17 | MC |
| SRR5856932 | leaf | salt | 0.78 | MC |
| SRR5856933 | leaf | control | 2.09 | MC |
| SRR5856936 | leaf | salt | 1.69 | MC |
| SRR5856937 | leaf | salt | 1.01 | MC |
| SRR5856938 | leaf | salt | 1.71 | MC |
| SRR6168973 | leaf | none (control) | 1.60 | MC |
| SRR6168974 | leaf | none (control) | 1.79 | MC |
| SRR6168975 | leaf | none (control) | 1.34 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.96 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.40 | MC |
| SRR6168979 | leaf | none (control) | 1.27 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.91 | MC |
| SRR8582888 | panicle | AM | 1.95 | MC |
| SRR8582889 | panicle | AM | 0.47 | MC |
| SRR8582890 | panicle | AM | 0.99 | MC |
| SRR8582891 | panicle | PM | 3.17 | MC |
| SRR8582892 | panicle | PM | 5.42 | MC |
| SRR8582893 | panicle | PM | 1.64 | MC |
| SRR5110429 | panicle | Dawn | 3.56 | MC |
| SRR5110430 | panicle | Dawn | 4.61 | MC |
| SRR5110431 | panicle | Dawn | 3.84 | MC |
| SRR5110432 | panicle | Dawn | 3.55 | MC |
| SRR4947496 | root | control | 0.99 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.21 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.39 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.56 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.45 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.98 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.46 | MC |
| SRR5110445 | panicle | Dusk | 1.71 | MC |
| SRR5110446 | panicle | Dusk | 3.11 | MC |
| SRR5110447 | panicle | Dusk | 1.63 | MC |
| SRR5110448 | panicle | Dusk | 2.15 | MC |
| SRR5110450 | panicle | Dawn + 14h | 3.15 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.58 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.66 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.52 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.38 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.58 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.62 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.69 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.07 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.21 | MC |
| SRR1633182 | panicle | WT | 1.56 | MC |
| SRR5126148 | root | "mock,1_day" | 2.10 | MC |
| SRR5126149 | root | "mock,1_day" | 4.71 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.18 | MC |
| SRR5126169 | root | "mock,14_days" | 4.33 | MC |
| SRR1213694 | root | wt | 1.63 | MC |
| SRR1213695 | root | wt | 1.17 | MC |
| SRR4947481 | root | control | 2.62 | MC |
| SRR4947483 | root | Al | 3.33 | MC |
| SRR4947485 | root | Al | 0.80 | MC |
| SRR4947488 | root | control | 1.17 | MC |
| SRR4947490 | root | Al | 0.99 | MC |
| SRR4947494 | root | control | 1.30 | MC |
| SRR4947498 | root | Al | 1.85 | MC |
| SRR4947499 | root | Al | 1.73 | MC |
| SRR4947501 | root | Al | 1.40 | MC |
| SRR4947503 | root | control | 1.61 | MC |
| SRR4947504 | root | control | 0.75 | MC |
| SRR4947505 | root | control | 1.95 | MC |
| SRR4947506 | root | Al | 3.63 | MC |
| SRR4947507 | root | Al | 1.59 | MC |
| SRR4947509 | root | Al | 2.42 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.60 | MC |
| SRR6502095 | root | control | 2.92 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.24 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.69 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.14 | MC |
| SRR6502107 | root | control | 3.71 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.20 | MC |
| SRR6441554 | seedling | wild_type | 1.26 | MC |
| SRR6441555 | seedling | wild_type | 1.13 | MC |
| SRR2154086 | seedling | wt | 1.98 | MC |
| SRR2154082 | seedling | wt | 2.62 | MC |
| SRR2154083 | seedling | wt | 1.76 | MC |
| SRR2154084 | seedling | wt | 1.39 | MC |
| SRR2154085 | seedling | wt | 1.33 | MC |
| SRR2154087 | seedling | wt | 2.44 | MC |
| SRR1944583 | seedling | no_treatment | 1.44 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.72 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.90 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.92 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.78 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.84 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.55 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.08 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.83 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.66 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.86 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.64 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.97 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.44 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.70 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.80 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 4.30 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.65 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.06 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.06 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.76 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.94 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.00 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.94 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.65 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.82 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.03 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.28 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.70 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.30 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.23 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.66 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.72 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.75 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.86 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.17 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.92 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.92 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.25 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.39 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.06 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.16 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.78 | MC |