| SRR4457249 | 2nd_leaf | DAH4 | 2.62 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.95 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.07 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.16 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.73 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.88 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.43 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.81 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.18 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.11 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.39 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.23 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.72 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.29 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 4.22 | MC |
| SRR3745126 | anther | wt | 2.65 | MC |
| SRR358797 | callus | wt | 7.84 | MC |
| SRR6320473 | carpel | wt | 1.59 | MC |
| SRR5560728 | caryopsis | wild_type | 4.02 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.77 | MC |
| SRR7265412 | coleoptile | 4dA | 2.32 | MC |
| SRR7265413 | coleoptile | 4dA | 2.07 | MC |
| SRR7265416 | coleoptile | 4dN | 4.23 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.93 | MC |
| SRR2338869 | endosprem | high_temperature | 2.68 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.63 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.10 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.08 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.00 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.38 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.38 | MC |
| SRR4457239 | flag_leaf | DAH20 | 4.04 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.39 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.10 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.72 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.70 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.10 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.70 | MC |
| SRR8060835 | leaf | wild_type | 1.21 | MC |
| SRR8060836 | leaf | wild_type | 2.47 | MC |
| SRR8060837 | leaf | wild_type | 0.92 | MC |
| SRR8240825 | leaf | wild_type | 2.30 | MC |
| SRR8240818 | leaf | wild_type | 1.52 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.81 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.08 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.98 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.46 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.11 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.30 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.29 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.57 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.80 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.64 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.75 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.50 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.33 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.05 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.58 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.05 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.58 | MC |
| SRR1761528 | leaf | drought | 4.05 | MC |
| SRR1761531 | leaf | control | 3.58 | MC |
| SRR504365 | leaf | wt | 3.60 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.75 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.69 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.57 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.87 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.14 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 4.15 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.38 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.54 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.55 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.75 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.97 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.73 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.34 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.61 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.64 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.85 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.82 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.76 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.00 | MC |
| SRR6502102 | leaf | control | 1.84 | MC |
| SRR5856931 | leaf | salt | 1.86 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.92 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 6.46 | MC |
| SRR6168975 | leaf | none (control) | 2.32 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 3.76 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 5.94 | MC |
| SRR6168979 | leaf | none (control) | 1.02 | MC |
| SRR6168980 | leaf | none (control) | 1.40 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.58 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.95 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.78 | MC |
| SRR8582888 | panicle | AM | 0.48 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.92 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.86 | MC |
| SRR5126147 | root | "mock,1_day" | 2.65 | MC |
| SRR5126149 | root | "mock,1_day" | 1.25 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.58 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.26 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.30 | MC |
| SRR4947482 | root | Al | 3.38 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.12 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.30 | MC |
| SRR6502096 | root | control | 1.91 | MC |
| SRR6441554 | seedling | wild_type | 3.11 | MC |
| SRR6441555 | seedling | wild_type | 1.69 | MC |
| SRR3098741 | seedling | wt | 2.07 | MC |
| SRR3098742 | seedling | wt | 1.82 | MC |
| SRR3098743 | seedling | wt | 1.89 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.49 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.54 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.33 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.56 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.60 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.09 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.00 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.28 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.78 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.68 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 6.13 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.16 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.07 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.71 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.88 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.48 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.06 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.80 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 6.31 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.55 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.27 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.16 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.40 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.07 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.49 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.95 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.88 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.66 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.80 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.03 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.31 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.47 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.35 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.02 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.11 | MC |