| SRR6320498 | carpel | wt | 1.28 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.99 | MC |
| SRR4947495 | root | control | 2.33 | MC |
| SRR7265400 | coleoptile | 2dA | 2.07 | MC |
| SRR7265401 | coleoptile | 2dA | 1.89 | MC |
| SRR7265402 | coleoptile | 2dA | 2.65 | MC |
| SRR7265403 | coleoptile | 2dN | 0.35 | MC |
| SRR7265404 | coleoptile | 2dN | 0.91 | MC |
| SRR7265405 | coleoptile | 2dN | 0.44 | MC |
| SRR7265406 | coleoptile | 3dA | 0.30 | MC |
| SRR7265407 | coleoptile | 3dA | 0.37 | MC |
| SRR7265410 | coleoptile | 3dN | 0.35 | MC |
| SRR7265411 | coleoptile | 3dN | 0.35 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.02 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.79 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.40 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.78 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.84 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.75 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.88 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.15 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.18 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.13 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.98 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.15 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.74 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.46 | MC |
| SRR7265376 | embryo | 1hA | 0.92 | MC |
| SRR7265377 | embryo | 1hA | 0.52 | MC |
| SRR7265378 | embryo | 1hA | 0.54 | MC |
| SRR7265379 | embryo | 1hN | 0.76 | MC |
| SRR7265381 | embryo | 1hN | 0.52 | MC |
| SRR7265386 | embryo | 3hN | 0.53 | MC |
| SRR7265387 | embryo | 3hN | 0.42 | MC |
| SRR7265391 | embryo | 12hN | 0.57 | MC |
| SRR7265392 | embryo | 12hN | 0.44 | MC |
| SRR7265393 | embryo | 12hN | 0.60 | MC |
| SRR1213691 | flower | wt | 0.66 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.49 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.05 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.23 | MC |
| SRR6502089 | leaf | control | 0.41 | MC |
| SRR5856927 | leaf | control | 2.35 | MC |
| SRR5856930 | leaf | salt | 1.17 | MC |
| SRR5856931 | leaf | salt | 0.86 | MC |
| SRR5856932 | leaf | salt | 0.58 | MC |
| SRR5856936 | leaf | salt | 0.52 | MC |
| SRR5856937 | leaf | salt | 0.76 | MC |
| SRR5856938 | leaf | salt | 0.54 | MC |
| SRR4947496 | root | control | 0.53 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.20 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.79 | MC |
| SRR5126147 | root | "mock,1_day" | 2.73 | MC |
| SRR5126149 | root | "mock,1_day" | 1.85 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.12 | MC |
| SRR5126153 | root | "mock,7_days" | 3.54 | MC |
| SRR5126155 | root | "mock,7_days" | 2.36 | MC |
| SRR5126157 | root | "mock,7_days" | 0.61 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.70 | MC |
| SRR5126165 | root | "mock,14_days" | 1.21 | MC |
| SRR5126167 | root | "mock,14_days" | 0.56 | MC |
| SRR5126169 | root | "mock,14_days" | 2.57 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.98 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.66 | MC |
| SRR1213695 | root | wt | 0.14 | MC |
| SRR4947478 | root | control | 2.19 | MC |
| SRR4947479 | root | control | 1.17 | MC |
| SRR4947480 | root | control | 0.56 | MC |
| SRR4947482 | root | Al | 1.16 | MC |
| SRR4947483 | root | Al | 1.77 | MC |
| SRR4947484 | root | Al | 1.13 | MC |
| SRR4947485 | root | Al | 0.77 | MC |
| SRR4947487 | root | control | 2.28 | MC |
| SRR4947488 | root | control | 0.56 | MC |
| SRR4947489 | root | control | 1.11 | MC |
| SRR4947490 | root | Al | 3.13 | MC |
| SRR4947491 | root | Al | 2.98 | MC |
| SRR4947492 | root | Al | 1.67 | MC |
| SRR4947493 | root | Al | 0.74 | MC |
| SRR4947494 | root | control | 3.63 | MC |
| SRR4947497 | root | control | 1.48 | MC |
| SRR4947499 | root | Al | 1.98 | MC |
| SRR4947500 | root | Al | 1.45 | MC |
| SRR4947501 | root | Al | 2.37 | MC |
| SRR4947502 | root | control | 2.79 | MC |
| SRR4947503 | root | control | 1.72 | MC |
| SRR4947504 | root | control | 0.52 | MC |
| SRR4947506 | root | Al | 1.00 | MC |
| SRR4947507 | root | Al | 3.15 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.91 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.45 | MC |
| SRR6502093 | root | 100 mM NaCl | 3.73 | MC |
| SRR6502094 | root | control | 2.64 | MC |
| SRR6502095 | root | control | 1.75 | MC |
| SRR6502096 | root | control | 2.69 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.55 | MC |
| SRR6502106 | root | control | 1.73 | MC |
| SRR6502107 | root | control | 2.86 | MC |
| SRR6502108 | root | control | 3.24 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.39 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.82 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.69 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.28 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.47 | MC |
| SRR6441555 | seedling | wild_type | 0.25 | MC |
| SRR2154082 | seedling | wt | 2.94 | MC |
| SRR2154083 | seedling | wt | 0.83 | MC |
| SRR2154084 | seedling | wt | 1.63 | MC |
| SRR2154085 | seedling | wt | 1.05 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.42 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.73 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.50 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.60 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.20 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.94 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.80 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.96 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.42 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.20 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.25 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.45 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.55 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.39 | MC |