| SRR4457252 | 2nd_leaf | DAH12 | 3.40 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.43 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.06 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.74 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.79 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.30 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.39 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.66 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.91 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.65 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.75 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.14 | MC |
| SRR3745125 | anther | wt | 3.55 | MC |
| SRR3745126 | anther | wt | 3.40 | MC |
| SRR3745127 | anther | wt | 3.96 | MC |
| SRR5560727 | caryopsis | wild_type | 4.28 | MC |
| SRR5560728 | caryopsis | wild_type | 3.80 | MC |
| SRR5560729 | caryopsis | wild_type | 3.52 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.53 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.40 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.81 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.19 | MC |
| SRR7265403 | coleoptile | 2dN | 0.36 | MC |
| SRR7265404 | coleoptile | 2dN | 0.44 | MC |
| SRR7265405 | coleoptile | 2dN | 0.41 | MC |
| SRR7265407 | coleoptile | 3dA | 0.31 | MC |
| SRR7265410 | coleoptile | 3dN | 0.38 | MC |
| SRR7265412 | coleoptile | 4dA | 0.72 | MC |
| SRR7265413 | coleoptile | 4dA | 1.86 | MC |
| SRR7265414 | coleoptile | 4dA | 1.38 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.41 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.39 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.62 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.45 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.25 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.28 | MC |
| SRR7265378 | embryo | 1hA | 0.38 | MC |
| SRR7265381 | embryo | 1hN | 0.26 | MC |
| SRR7265382 | embryo | 3hA | 0.46 | MC |
| SRR7265384 | embryo | 3hA | 0.33 | MC |
| SRR7265386 | embryo | 3hN | 0.29 | MC |
| SRR7265390 | embryo | 12hA | 0.52 | MC |
| SRR7265391 | embryo | 12hN | 0.94 | MC |
| SRR7265392 | embryo | 12hN | 0.76 | MC |
| SRR7265393 | embryo | 12hN | 0.82 | MC |
| SRR7265395 | embryo | 24hA | 0.47 | MC |
| SRR7265396 | embryo | 24hA | 0.56 | MC |
| SRR7265398 | embryo | 24hN | 0.81 | MC |
| SRR7265399 | embryo | 24hN | 0.74 | MC |
| SRR976168 | flag_leaf | wild_type | 0.94 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.49 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.23 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.14 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.09 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.03 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.60 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.59 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.29 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.42 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.52 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.40 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.54 | MC |
| SRR1213691 | flower | wt | 0.82 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.41 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.71 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.53 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.34 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.75 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.23 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.63 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.29 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.42 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.35 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.17 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.85 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.61 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.87 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.23 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.50 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.08 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.94 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.21 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.74 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.87 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.86 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.47 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.37 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.43 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.71 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.40 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.21 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.49 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.85 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.44 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.54 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.17 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.16 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.88 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.68 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.20 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.36 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.57 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.40 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.20 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.36 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.57 | MC |
| SRR1761528 | leaf | drought | 1.68 | MC |
| SRR1761529 | leaf | drought | 1.20 | MC |
| SRR1761530 | leaf | control | 5.36 | MC |
| SRR1761531 | leaf | control | 4.57 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.61 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.34 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.30 | MC |
| SRR6417967 | leaf | H2O_control | 2.47 | MC |
| SRR6417968 | leaf | H2O_control | 2.62 | MC |
| SRR6417969 | leaf | H2O_control | 3.05 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.97 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.31 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.10 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.36 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.58 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.51 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.36 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.76 | MC |
| SRR1213692 | leaf | wt | 4.40 | MC |
| SRR1213693 | leaf | wt | 3.39 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.52 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.99 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.82 | MC |
| SRR6502088 | leaf | control | 1.69 | MC |
| SRR6502089 | leaf | control | 1.29 | MC |
| SRR6502090 | leaf | control | 1.94 | MC |
| SRR6168973 | leaf | none (control) | 3.02 | MC |
| SRR6168974 | leaf | none (control) | 2.46 | MC |
| SRR6168975 | leaf | none (control) | 2.86 | MC |
| SRR6168979 | leaf | none (control) | 0.48 | MC |
| SRR6168980 | leaf | none (control) | 0.32 | MC |
| SRR6168981 | leaf | none (control) | 0.75 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.49 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.34 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.23 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.29 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.38 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.18 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.02 | MC |
| SRR5126147 | root | "mock,1_day" | 2.34 | MC |
| SRR5126148 | root | "mock,1_day" | 2.28 | MC |
| SRR5126149 | root | "mock,1_day" | 2.44 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.29 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.44 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.69 | MC |
| SRR5126153 | root | "mock,7_days" | 1.07 | MC |
| SRR5126155 | root | "mock,7_days" | 1.71 | MC |
| SRR5126157 | root | "mock,7_days" | 1.70 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.51 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.70 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.91 | MC |
| SRR5126165 | root | "mock,14_days" | 1.65 | MC |
| SRR5126167 | root | "mock,14_days" | 0.93 | MC |
| SRR5126169 | root | "mock,14_days" | 1.96 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.37 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.00 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.07 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.81 | MC |
| SRR1213694 | root | wt | 0.44 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.80 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.47 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.98 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.33 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.88 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.51 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.83 | MC |
| SRR6441554 | seedling | wild_type | 2.88 | MC |
| SRR6441555 | seedling | wild_type | 2.96 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.84 | MC |
| SRR358793 | seedling | wt | 1.18 | MC |
| SRR358794 | seedling | wt | 3.13 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.71 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.22 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.14 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.00 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.63 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.20 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.98 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.08 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.50 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.77 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.31 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.38 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.98 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.31 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.60 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.91 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.89 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.68 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 0.86 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.05 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.21 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.60 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.20 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.91 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.47 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.67 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.41 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.93 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.78 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.07 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.24 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.84 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.22 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.22 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.48 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.35 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.89 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.57 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.64 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.93 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.11 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.91 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.80 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.75 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.06 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.26 | MC |