| SRR4457252 | 2nd_leaf | DAH12 | 0.26 | MC |
| SRR5560729 | caryopsis | wild_type | 0.28 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.98 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.72 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.66 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.95 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.30 | MC |
| SRR8060835 | leaf | wild_type | 0.31 | MC |
| SRR8240819 | leaf | wild_type | 0.36 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.76 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.64 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.40 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.29 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.40 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.35 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.79 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.68 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.65 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.37 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.59 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.69 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.97 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.23 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.97 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.13 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.81 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.88 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.40 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.24 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.99 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.40 | MC |
| SRR1213693 | leaf | wt | 0.48 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.33 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.96 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.88 | MC |
| SRR6502100 | leaf | control | 1.17 | MC |
| SRR6502101 | leaf | control | 1.23 | MC |
| SRR6502102 | leaf | control | 0.89 | MC |
| SRR8582888 | panicle | AM | 0.34 | MC |
| SRR8582889 | panicle | AM | 0.39 | MC |
| SRR8582890 | panicle | AM | 0.22 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.63 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.38 | MC |
| SRR5126148 | root | "mock,1_day" | 1.03 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.63 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.41 | MC |
| SRR5126155 | root | "mock,7_days" | 0.30 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126169 | root | "mock,14_days" | 0.30 | MC |
| SRR1213695 | root | wt | 0.31 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.67 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.39 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.05 | MC |
| SRR6502106 | root | control | 1.02 | MC |
| SRR6502107 | root | control | 1.69 | MC |
| SRR6502108 | root | control | 0.94 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.88 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.56 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.28 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.76 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.70 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.51 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.84 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.24 | MC |
| SRR3098741 | seedling | wt | 0.28 | MC |
| SRR3098742 | seedling | wt | 0.16 | MC |
| SRR3098743 | seedling | wt | 0.88 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.52 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.95 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.32 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.64 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.88 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.42 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.61 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.27 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.37 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.65 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.46 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.85 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.96 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.32 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.70 | MC |