| SRR5560729 | caryopsis | wild_type | 0.62 | MC |
| SRR4947495 | root | control | 0.79 | MC |
| SRR7265400 | coleoptile | 2dA | 0.29 | MC |
| SRR7265405 | coleoptile | 2dN | 0.53 | MC |
| SRR7265410 | coleoptile | 3dN | 0.38 | MC |
| SRR7265411 | coleoptile | 3dN | 0.44 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.44 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.21 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.88 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.01 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.43 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.65 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.17 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.53 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.28 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.38 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.12 | MC |
| SRR7265378 | embryo | 1hA | 0.29 | MC |
| SRR7265387 | embryo | 3hN | 0.32 | MC |
| SRR7265394 | embryo | 24hA | 0.72 | MC |
| SRR7265398 | embryo | 24hN | 0.58 | MC |
| SRR7265399 | embryo | 24hN | 0.49 | MC |
| SRR8060836 | leaf | wild_type | 0.27 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.38 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.26 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.21 | MC |
| SRR5856927 | leaf | control | 0.46 | MC |
| SRR5856928 | leaf | control | 0.32 | MC |
| SRR5856929 | leaf | control | 0.85 | MC |
| SRR5856930 | leaf | salt | 0.84 | MC |
| SRR5856931 | leaf | salt | 0.47 | MC |
| SRR5856932 | leaf | salt | 0.51 | MC |
| SRR5856934 | leaf | control | 0.39 | MC |
| SRR5856935 | leaf | control | 0.37 | MC |
| SRR5856936 | leaf | salt | 0.38 | MC |
| SRR5856937 | leaf | salt | 0.32 | MC |
| SRR6168973 | leaf | none (control) | 0.29 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.88 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.49 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR6168979 | leaf | none (control) | 0.36 | MC |
| SRR5110432 | panicle | Dawn | 0.50 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.67 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.43 | MC |
| SRR5110445 | panicle | Dusk | 0.47 | MC |
| SRR5110446 | panicle | Dusk | 0.60 | MC |
| SRR5110448 | panicle | Dusk | 0.93 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.46 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.42 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.40 | MC |
| SRR1633185 | panicle | WT | 0.35 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.70 | MC |
| SRR5126147 | root | "mock,1_day" | 0.56 | MC |
| SRR5126148 | root | "mock,1_day" | 0.34 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.37 | MC |
| SRR5126153 | root | "mock,7_days" | 0.33 | MC |
| SRR5126167 | root | "mock,14_days" | 0.64 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.41 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.73 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.76 | MC |
| SRR4947483 | root | Al | 0.42 | MC |
| SRR4947487 | root | control | 0.50 | MC |
| SRR4947507 | root | Al | 0.57 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.57 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.51 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.31 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.41 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.21 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.35 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.24 | MC |
| SRR2154082 | seedling | wt | 0.70 | MC |
| SRR2154083 | seedling | wt | 0.67 | MC |
| SRR2154084 | seedling | wt | 0.59 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.44 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.46 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.22 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.72 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.62 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.28 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.14 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.95 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.27 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.54 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.21 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.13 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.42 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.94 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.38 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.96 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.73 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.42 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.18 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.16 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.98 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.90 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.71 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.50 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.70 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.03 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.71 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.76 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.79 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.15 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.72 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.07 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.20 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.71 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.56 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.27 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.19 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.99 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.87 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.65 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.60 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.38 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.67 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.50 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.28 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.24 | MC |