| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.67 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.18 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.34 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.40 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.86 | MC |
| SRR8060835 | leaf | wild_type | 0.39 | MC |
| SRR8060837 | leaf | wild_type | 0.72 | MC |
| SRR8240824 | leaf | wild_type | 1.92 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.49 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.47 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.47 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.79 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.62 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.79 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.60 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.32 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.33 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.61 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.68 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.96 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.41 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.41 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.68 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.69 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.63 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.50 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.55 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.81 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.51 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.48 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.34 | MC |
| SRR1761529 | leaf | drought | 0.55 | MC |
| SRR1761530 | leaf | control | 0.51 | MC |
| SRR1761531 | leaf | control | 1.03 | MC |
| SRR504365 | leaf | wt | 1.56 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.65 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.35 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.33 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.71 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.31 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.28 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.46 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.57 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.44 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.44 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.26 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.40 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR1213692 | leaf | wt | 0.44 | MC |
| SRR1213693 | leaf | wt | 0.41 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.42 | MC |
| SRR6502100 | leaf | control | 0.42 | MC |
| SRR6502101 | leaf | control | 0.38 | MC |
| SRR8582890 | panicle | AM | 0.53 | MC |
| SRR8582891 | panicle | PM | 1.12 | MC |
| SRR8582892 | panicle | PM | 1.35 | MC |
| SRR8582893 | panicle | PM | 1.43 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.62 | MC |
| SRR5126147 | root | "mock,1_day" | 0.36 | MC |
| SRR5126149 | root | "mock,1_day" | 0.56 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.35 | MC |
| SRR5126157 | root | "mock,7_days" | 0.52 | MC |
| SRR5126169 | root | "mock,14_days" | 0.36 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.30 | MC |
| SRR1213695 | root | wt | 0.52 | MC |
| SRR6502094 | root | control | 0.41 | MC |
| SRR6441555 | seedling | wild_type | 0.74 | MC |
| SRR2154084 | seedling | wt | 0.58 | MC |
| SRR3098743 | seedling | wt | 0.19 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.66 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.43 | MC |
| SRR1944583 | seedling | no_treatment | 0.51 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.83 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.36 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.40 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.76 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.08 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.23 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.56 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.47 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.88 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.84 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.86 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.99 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.46 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.08 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.62 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.61 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.99 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.89 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.76 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.86 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.53 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.67 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.40 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.51 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.16 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.34 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.64 | MC |