| SRR358795 | callus | wt | 2.56 | MC |
| SRR358796 | callus | wt | 2.56 | MC |
| SRR358797 | callus | wt | 2.60 | MC |
| SRR358798 | callus | wt | 1.93 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.85 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.09 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.62 | MC |
| SRR4947495 | root | control | 3.46 | MC |
| SRR7265402 | coleoptile | 2dA | 1.53 | MC |
| SRR7265404 | coleoptile | 2dN | 3.28 | MC |
| SRR7265405 | coleoptile | 2dN | 0.42 | MC |
| SRR7265407 | coleoptile | 3dA | 0.23 | MC |
| SRR7265408 | coleoptile | 3dA | 0.53 | MC |
| SRR7265410 | coleoptile | 3dN | 2.58 | MC |
| SRR7265411 | coleoptile | 3dN | 2.55 | MC |
| SRR7265413 | coleoptile | 4dA | 0.50 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.00 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.86 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.57 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.35 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.24 | MC |
| SRR7265376 | embryo | 1hA | 0.71 | MC |
| SRR7265377 | embryo | 1hA | 0.45 | MC |
| SRR7265378 | embryo | 1hA | 0.92 | MC |
| SRR7265379 | embryo | 1hN | 0.35 | MC |
| SRR7265380 | embryo | 1hN | 0.69 | MC |
| SRR7265381 | embryo | 1hN | 1.05 | MC |
| SRR7265382 | embryo | 3hA | 0.55 | MC |
| SRR7265383 | embryo | 3hA | 1.06 | MC |
| SRR7265384 | embryo | 3hA | 1.54 | MC |
| SRR7265385 | embryo | 3hN | 0.68 | MC |
| SRR7265386 | embryo | 3hN | 0.63 | MC |
| SRR7265387 | embryo | 3hN | 0.39 | MC |
| SRR7265388 | embryo | 12hA | 2.29 | MC |
| SRR7265390 | embryo | 12hA | 2.35 | MC |
| SRR7265391 | embryo | 12hN | 3.11 | MC |
| SRR7265393 | embryo | 12hN | 0.63 | MC |
| SRR7265394 | embryo | 24hA | 0.54 | MC |
| SRR7265395 | embryo | 24hA | 2.34 | MC |
| SRR7265396 | embryo | 24hA | 1.64 | MC |
| SRR7265397 | embryo | 24hN | 0.60 | MC |
| SRR7265398 | embryo | 24hN | 4.06 | MC |
| SRR7265399 | embryo | 24hN | 3.42 | MC |
| SRR2338866 | endosprem | control | 1.58 | MC |
| SRR2338867 | endosprem | control | 0.42 | MC |
| SRR2338868 | endosprem | high_temperature | 0.67 | MC |
| SRR2338869 | endosprem | high_temperature | 0.54 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.34 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.59 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.63 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.38 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.45 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.88 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.44 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.53 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.72 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.47 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.63 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.63 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.54 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.39 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.69 | MC |
| SRR504365 | leaf | wt | 1.87 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.50 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.47 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.41 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.30 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.64 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.77 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.66 | MC |
| SRR6502088 | leaf | control | 1.46 | MC |
| SRR6502089 | leaf | control | 2.76 | MC |
| SRR6502090 | leaf | control | 2.55 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.31 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.38 | MC |
| SRR6502100 | leaf | control | 0.52 | MC |
| SRR6502101 | leaf | control | 0.70 | MC |
| SRR6502102 | leaf | control | 0.55 | MC |
| SRR5856933 | leaf | control | 0.31 | MC |
| SRR5856935 | leaf | control | 0.48 | MC |
| SRR5856936 | leaf | salt | 0.30 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.03 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.41 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.16 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.06 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.35 | MC |
| SRR8582890 | panicle | AM | 0.27 | MC |
| SRR8582891 | panicle | PM | 1.15 | MC |
| SRR8582892 | panicle | PM | 1.30 | MC |
| SRR8582893 | panicle | PM | 0.69 | MC |
| SRR4947496 | root | control | 3.50 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.75 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.33 | MC |
| SRR5126147 | root | "mock,1_day" | 0.43 | MC |
| SRR5126148 | root | "mock,1_day" | 0.44 | MC |
| SRR5126149 | root | "mock,1_day" | 0.69 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.63 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.50 | MC |
| SRR5126155 | root | "mock,7_days" | 0.58 | MC |
| SRR5126157 | root | "mock,7_days" | 0.69 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.56 | MC |
| SRR5126167 | root | "mock,14_days" | 0.40 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.40 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR4947478 | root | control | 3.82 | MC |
| SRR4947480 | root | control | 2.52 | MC |
| SRR4947481 | root | control | 3.21 | MC |
| SRR4947482 | root | Al | 1.69 | MC |
| SRR4947484 | root | Al | 2.92 | MC |
| SRR4947485 | root | Al | 4.10 | MC |
| SRR4947488 | root | control | 3.31 | MC |
| SRR4947489 | root | control | 4.03 | MC |
| SRR4947490 | root | Al | 3.04 | MC |
| SRR4947493 | root | Al | 4.76 | MC |
| SRR4947494 | root | control | 4.17 | MC |
| SRR4947497 | root | control | 1.50 | MC |
| SRR4947498 | root | Al | 4.93 | MC |
| SRR4947499 | root | Al | 5.00 | MC |
| SRR4947500 | root | Al | 2.89 | MC |
| SRR4947502 | root | control | 4.46 | MC |
| SRR4947505 | root | control | 5.60 | MC |
| SRR4947507 | root | Al | 5.72 | MC |
| SRR4947508 | root | Al | 3.31 | MC |
| SRR4947509 | root | Al | 4.41 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.69 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.19 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.93 | MC |
| SRR6502094 | root | control | 1.54 | MC |
| SRR6502095 | root | control | 1.51 | MC |
| SRR6502096 | root | control | 1.31 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.76 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.69 | MC |
| SRR6502107 | root | control | 0.40 | MC |
| SRR6502108 | root | control | 0.44 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.52 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.52 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.50 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.82 | MC |
| SRR2154087 | seedling | wt | 1.43 | MC |
| SRR3098741 | seedling | wt | 0.37 | MC |
| SRR3098743 | seedling | wt | 0.49 | MC |
| SRR1944583 | seedling | no_treatment | 0.51 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.65 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.48 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.13 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.99 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.22 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.52 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.39 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.43 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.17 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.65 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.18 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.53 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.83 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.61 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.52 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.59 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.52 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.50 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.26 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.30 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.44 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.64 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.52 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.66 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.34 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.54 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.29 | MC |