| SRR3745126 | anther | wt | 1.02 | MC |
| SRR3745127 | anther | wt | 1.90 | MC |
| SRR7265400 | coleoptile | 2dA | 1.80 | MC |
| SRR7265401 | coleoptile | 2dA | 2.10 | MC |
| SRR7265402 | coleoptile | 2dA | 0.68 | MC |
| SRR7265403 | coleoptile | 2dN | 1.67 | MC |
| SRR7265404 | coleoptile | 2dN | 2.17 | MC |
| SRR7265405 | coleoptile | 2dN | 1.17 | MC |
| SRR7265407 | coleoptile | 3dA | 0.55 | MC |
| SRR7265408 | coleoptile | 3dA | 0.54 | MC |
| SRR7265409 | coleoptile | 3dN | 1.76 | MC |
| SRR7265410 | coleoptile | 3dN | 1.21 | MC |
| SRR7265411 | coleoptile | 3dN | 1.19 | MC |
| SRR7265412 | coleoptile | 4dA | 0.78 | MC |
| SRR7265413 | coleoptile | 4dA | 1.58 | MC |
| SRR7265414 | coleoptile | 4dA | 0.72 | MC |
| SRR7265415 | coleoptile | 4dN | 2.25 | MC |
| SRR7265416 | coleoptile | 4dN | 1.91 | MC |
| SRR7265417 | coleoptile | 4dN | 1.39 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.84 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.49 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.14 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.90 | MC |
| SRR7265376 | embryo | 1hA | 1.04 | MC |
| SRR7265377 | embryo | 1hA | 1.21 | MC |
| SRR7265378 | embryo | 1hA | 0.91 | MC |
| SRR7265379 | embryo | 1hN | 0.78 | MC |
| SRR7265380 | embryo | 1hN | 1.14 | MC |
| SRR7265381 | embryo | 1hN | 0.88 | MC |
| SRR7265382 | embryo | 3hA | 1.47 | MC |
| SRR7265383 | embryo | 3hA | 2.34 | MC |
| SRR7265384 | embryo | 3hA | 1.20 | MC |
| SRR7265385 | embryo | 3hN | 0.62 | MC |
| SRR7265386 | embryo | 3hN | 0.83 | MC |
| SRR7265387 | embryo | 3hN | 0.76 | MC |
| SRR7265388 | embryo | 12hA | 2.72 | MC |
| SRR7265389 | embryo | 12hA | 2.56 | MC |
| SRR7265390 | embryo | 12hA | 3.98 | MC |
| SRR7265391 | embryo | 12hN | 3.22 | MC |
| SRR7265392 | embryo | 12hN | 3.28 | MC |
| SRR7265393 | embryo | 12hN | 2.58 | MC |
| SRR7265394 | embryo | 24hA | 1.71 | MC |
| SRR7265395 | embryo | 24hA | 2.16 | MC |
| SRR7265396 | embryo | 24hA | 1.45 | MC |
| SRR7265397 | embryo | 24hN | 3.26 | MC |
| SRR7265398 | embryo | 24hN | 2.16 | MC |
| SRR7265399 | embryo | 24hN | 2.78 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.04 | MC |
| SRR1213691 | flower | wt | 1.21 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.39 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.62 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.94 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.55 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.43 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.45 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.83 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.76 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.53 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.31 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.53 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.93 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.74 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.94 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.03 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.56 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.53 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.71 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.10 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.67 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.64 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.18 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.00 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.94 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.50 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.30 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.94 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.75 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.63 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.70 | MC |
| SRR1761528 | leaf | drought | 0.75 | MC |
| SRR1761529 | leaf | drought | 1.62 | MC |
| SRR1761531 | leaf | control | 0.94 | MC |
| SRR504365 | leaf | wt | 0.89 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.48 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.43 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.43 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.10 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.75 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.72 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.31 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.82 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.71 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.33 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.09 | MC |
| SRR1213692 | leaf | wt | 0.81 | MC |
| SRR1213693 | leaf | wt | 0.80 | MC |
| SRR6502088 | leaf | control | 0.42 | MC |
| SRR6502089 | leaf | control | 0.42 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.55 | MC |
| SRR6502100 | leaf | control | 0.60 | MC |
| SRR6502101 | leaf | control | 0.34 | MC |
| SRR5110430 | panicle | Dawn | 0.60 | MC |
| SRR5110431 | panicle | Dawn | 0.75 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.80 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.08 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.27 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.18 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.31 | MC |
| SRR5110445 | panicle | Dusk | 1.80 | MC |
| SRR5110446 | panicle | Dusk | 0.45 | MC |
| SRR5110448 | panicle | Dusk | 0.77 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.04 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.42 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.65 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.54 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.43 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.42 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.32 | MC |
| SRR1633182 | panicle | WT | 0.37 | MC |
| SRR5126147 | root | "mock,1_day" | 0.46 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.41 | MC |
| SRR5126157 | root | "mock,7_days" | 1.05 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126165 | root | "mock,14_days" | 0.57 | MC |
| SRR1213694 | root | wt | 0.67 | MC |
| SRR1213695 | root | wt | 1.12 | MC |
| SRR4947484 | root | Al | 1.12 | MC |
| SRR4947492 | root | Al | 1.55 | MC |
| SRR4947497 | root | control | 0.75 | MC |
| SRR4947501 | root | Al | 1.54 | MC |
| SRR4947504 | root | control | 2.06 | MC |
| SRR4947508 | root | Al | 1.22 | MC |
| SRR4947509 | root | Al | 1.17 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.35 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.40 | MC |
| SRR6502094 | root | control | 0.47 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.80 | MC |
| SRR6502107 | root | control | 0.37 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.01 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.39 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.38 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.56 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.34 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.15 | MC |
| SRR2154086 | seedling | wt | 1.27 | MC |
| SRR2154083 | seedling | wt | 0.28 | MC |
| SRR1944583 | seedling | no_treatment | 0.44 | MC |
| SRR358791 | seedling | wt | 0.86 | MC |
| SRR358793 | seedling | wt | 1.25 | MC |
| SRR358794 | seedling | wt | 0.51 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.84 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.14 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.03 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.09 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.73 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.99 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.03 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.49 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.64 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.62 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.60 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.64 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.58 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.52 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.52 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.05 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.63 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.36 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.25 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.07 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.21 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.92 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.66 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.81 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.83 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.15 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.31 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.24 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.14 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.46 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.74 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.04 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.76 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.16 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.45 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.09 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.18 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.33 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.25 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.06 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.37 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.40 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.89 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.70 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.46 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.70 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.42 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.43 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.46 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.15 | MC |