| SRR3745125 | anther | wt | 2.03 | MC |
| SRR3745126 | anther | wt | 1.83 | MC |
| SRR3745127 | anther | wt | 2.04 | MC |
| SRR5560727 | caryopsis | wild_type | 0.57 | MC |
| SRR5560728 | caryopsis | wild_type | 0.72 | MC |
| SRR5560729 | caryopsis | wild_type | 0.48 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.91 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.52 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR2338868 | endosprem | high_temperature | 0.46 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.95 | MC |
| SRR1213691 | flower | wt | 0.82 | MC |
| SRR8240824 | leaf | wild_type | 0.41 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.42 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.52 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.43 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.48 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.43 | MC |
| SRR1761528 | leaf | drought | 0.48 | MC |
| SRR1761529 | leaf | drought | 0.43 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.20 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.44 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.48 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.53 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.65 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.38 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.97 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.62 | MC |
| SRR8582888 | panicle | AM | 0.92 | MC |
| SRR8582889 | panicle | AM | 0.90 | MC |
| SRR8582890 | panicle | AM | 0.28 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.25 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.23 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.40 | MC |
| SRR1213694 | root | wt | 0.29 | MC |
| SRR4947488 | root | control | 0.47 | MC |
| SRR4947489 | root | control | 0.63 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.45 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.41 | MC |
| SRR6441555 | seedling | wild_type | 0.25 | MC |
| SRR2154086 | seedling | wt | 0.42 | MC |
| SRR2154085 | seedling | wt | 0.39 | MC |
| SRR3098741 | seedling | wt | 0.33 | MC |
| SRR3098742 | seedling | wt | 0.20 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.37 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.32 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.27 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.68 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.20 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.05 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.79 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.33 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.31 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.36 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.65 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.03 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.00 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.90 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.13 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.10 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.72 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.33 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.65 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.74 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.51 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.37 | MC |