| SRR4457249 | 2nd_leaf | DAH4 | 3.45 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.14 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.39 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.33 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.14 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.25 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.54 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.91 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.85 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.74 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.67 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.21 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.53 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.10 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.63 | MC |
| SRR3745125 | anther | wt | 2.07 | MC |
| SRR358796 | callus | wt | 1.46 | MC |
| SRR6320473 | carpel | wt | 3.96 | MC |
| SRR6320498 | carpel | wt | 2.42 | MC |
| SRR4947495 | root | control | 3.39 | MC |
| SRR7265400 | coleoptile | 2dA | 1.25 | MC |
| SRR7265410 | coleoptile | 3dN | 1.98 | MC |
| SRR7265411 | coleoptile | 3dN | 1.41 | MC |
| SRR7265412 | coleoptile | 4dA | 1.87 | MC |
| SRR7265415 | coleoptile | 4dN | 1.04 | MC |
| SRR7265416 | coleoptile | 4dN | 1.73 | MC |
| SRR7265417 | coleoptile | 4dN | 1.97 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.78 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.63 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.58 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.09 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.06 | MC |
| SRR7265385 | embryo | 3hN | 0.77 | MC |
| SRR7265393 | embryo | 12hN | 1.40 | MC |
| SRR7265394 | embryo | 24hA | 2.66 | MC |
| SRR7265399 | embryo | 24hN | 1.29 | MC |
| SRR4457232 | flag_leaf | DAH4 | 3.10 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.51 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.67 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.33 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.22 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.72 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.57 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.85 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.12 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.62 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.88 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.49 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.71 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.60 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.87 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.47 | MC |
| SRR1213691 | flower | wt | 3.17 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.71 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.02 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.46 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.44 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.74 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.23 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.44 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.82 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.23 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.44 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.82 | MC |
| SRR1761529 | leaf | drought | 4.23 | MC |
| SRR1761530 | leaf | control | 5.44 | MC |
| SRR1761531 | leaf | control | 3.82 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.57 | MC |
| SRR1213693 | leaf | wt | 2.80 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.42 | MC |
| SRR5110429 | panicle | Dawn | 4.38 | MC |
| SRR5110431 | panicle | Dawn | 4.17 | MC |
| SRR5110432 | panicle | Dawn | 3.10 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.02 | MC |
| SRR5110440 | panicle | Dawn + 7h | 4.23 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.41 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.58 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.82 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.06 | MC |
| SRR5126147 | root | "mock,1_day" | 0.94 | MC |
| SRR5126148 | root | "mock,1_day" | 1.85 | MC |
| SRR5126149 | root | "mock,1_day" | 2.46 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.45 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.96 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.82 | MC |
| SRR5126153 | root | "mock,7_days" | 1.75 | MC |
| SRR5126155 | root | "mock,7_days" | 2.68 | MC |
| SRR5126157 | root | "mock,7_days" | 4.34 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.69 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.14 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.94 | MC |
| SRR5126165 | root | "mock,14_days" | 1.18 | MC |
| SRR5126167 | root | "mock,14_days" | 1.19 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.68 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.04 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.49 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.03 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.64 | MC |
| SRR1213695 | root | wt | 2.09 | MC |
| SRR4947482 | root | Al | 3.49 | MC |
| SRR4947485 | root | Al | 4.72 | MC |
| SRR4947490 | root | Al | 3.55 | MC |
| SRR4947491 | root | Al | 4.53 | MC |
| SRR4947492 | root | Al | 5.38 | MC |
| SRR4947498 | root | Al | 3.16 | MC |
| SRR4947499 | root | Al | 3.79 | MC |
| SRR4947500 | root | Al | 5.25 | MC |
| SRR4947501 | root | Al | 5.20 | MC |
| SRR4947507 | root | Al | 3.18 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.35 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.01 | MC |
| SRR6502096 | root | control | 4.43 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.47 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.58 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.48 | MC |
| SRR6502106 | root | control | 1.65 | MC |
| SRR6502107 | root | control | 1.40 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.64 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.70 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.32 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.00 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.47 | MC |
| SRR2857719 | seedling | drought_stress_0h | 4.11 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.25 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.83 | MC |
| SRR358791 | seedling | wt | 3.61 | MC |
| SRR358792 | seedling | wt | 5.36 | MC |
| SRR358793 | seedling | wt | 5.00 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.04 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.94 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.34 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.94 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.52 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.62 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.95 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.73 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.25 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.30 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 6.25 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 3.52 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 7.04 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.76 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 6.09 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.19 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 4.81 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.72 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.36 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 4.24 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.04 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.97 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.16 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.30 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 3.47 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.52 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.91 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.24 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.96 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.96 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.76 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.44 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.37 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.92 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.00 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.23 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.08 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.70 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.53 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.13 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.85 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.63 | MC |