| SRR4457251 | 2nd_leaf | DAH4 | 0.31 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.33 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.43 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.58 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.18 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.58 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.83 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.75 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.16 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.59 | MC |
| SRR5560729 | caryopsis | wild_type | 0.46 | MC |
| SRR7265400 | coleoptile | 2dA | 1.99 | MC |
| SRR7265401 | coleoptile | 2dA | 1.46 | MC |
| SRR7265402 | coleoptile | 2dA | 1.39 | MC |
| SRR7265403 | coleoptile | 2dN | 1.56 | MC |
| SRR7265404 | coleoptile | 2dN | 1.78 | MC |
| SRR7265405 | coleoptile | 2dN | 1.33 | MC |
| SRR7265406 | coleoptile | 3dA | 0.76 | MC |
| SRR7265407 | coleoptile | 3dA | 0.88 | MC |
| SRR7265409 | coleoptile | 3dN | 3.01 | MC |
| SRR7265410 | coleoptile | 3dN | 3.05 | MC |
| SRR7265411 | coleoptile | 3dN | 3.66 | MC |
| SRR7265412 | coleoptile | 4dA | 1.55 | MC |
| SRR7265413 | coleoptile | 4dA | 4.07 | MC |
| SRR7265414 | coleoptile | 4dA | 2.85 | MC |
| SRR7265415 | coleoptile | 4dN | 4.03 | MC |
| SRR7265416 | coleoptile | 4dN | 3.01 | MC |
| SRR7265417 | coleoptile | 4dN | 3.68 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.43 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.74 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.98 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.68 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.16 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.21 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.23 | MC |
| SRR7265376 | embryo | 1hA | 0.71 | MC |
| SRR7265377 | embryo | 1hA | 2.19 | MC |
| SRR7265378 | embryo | 1hA | 0.43 | MC |
| SRR7265379 | embryo | 1hN | 0.78 | MC |
| SRR7265380 | embryo | 1hN | 1.11 | MC |
| SRR7265381 | embryo | 1hN | 0.89 | MC |
| SRR7265382 | embryo | 3hA | 0.89 | MC |
| SRR7265383 | embryo | 3hA | 1.40 | MC |
| SRR7265384 | embryo | 3hA | 0.94 | MC |
| SRR7265385 | embryo | 3hN | 1.13 | MC |
| SRR7265386 | embryo | 3hN | 2.09 | MC |
| SRR7265387 | embryo | 3hN | 1.46 | MC |
| SRR7265388 | embryo | 12hA | 1.13 | MC |
| SRR7265389 | embryo | 12hA | 0.55 | MC |
| SRR7265390 | embryo | 12hA | 0.48 | MC |
| SRR7265391 | embryo | 12hN | 0.66 | MC |
| SRR7265392 | embryo | 12hN | 0.92 | MC |
| SRR7265394 | embryo | 24hA | 1.45 | MC |
| SRR7265395 | embryo | 24hA | 1.52 | MC |
| SRR7265396 | embryo | 24hA | 1.53 | MC |
| SRR7265397 | embryo | 24hN | 1.13 | MC |
| SRR7265398 | embryo | 24hN | 1.14 | MC |
| SRR7265399 | embryo | 24hN | 0.90 | MC |
| SRR2338867 | endosprem | control | 0.76 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.29 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.20 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.33 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.29 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.35 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.65 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.44 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.90 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.71 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.85 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.79 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.98 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.93 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.41 | MC |
| SRR1213691 | flower | wt | 0.66 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.60 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.64 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.45 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.28 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.44 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.35 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.92 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.92 | MC |
| SRR1761530 | leaf | control | 0.92 | MC |
| SRR504365 | leaf | wt | 1.11 | MC |
| SRR6417969 | leaf | H2O_control | 0.48 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.60 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.57 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.52 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.67 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.68 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.81 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.70 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.73 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.37 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.46 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.35 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR1213692 | leaf | wt | 0.46 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.52 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502090 | leaf | control | 0.36 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.57 | MC |
| SRR6502100 | leaf | control | 0.48 | MC |
| SRR8582891 | panicle | PM | 0.46 | MC |
| SRR8582892 | panicle | PM | 0.71 | MC |
| SRR5110429 | panicle | Dawn | 0.82 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.30 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.75 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.57 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.43 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.37 | MC |
| SRR5126157 | root | "mock,7_days" | 0.54 | MC |
| SRR5126165 | root | "mock,14_days" | 0.84 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.40 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR1213695 | root | wt | 0.27 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.49 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.48 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.39 | MC |
| SRR6502106 | root | control | 0.45 | MC |
| SRR6502107 | root | control | 0.34 | MC |
| SRR6441554 | seedling | wild_type | 0.45 | MC |
| SRR2154086 | seedling | wt | 0.38 | MC |
| SRR2154085 | seedling | wt | 0.46 | MC |
| SRR3098741 | seedling | wt | 0.39 | MC |
| SRR3098742 | seedling | wt | 0.36 | MC |
| SRR3098743 | seedling | wt | 0.57 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.53 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.34 | MC |
| SRR358792 | seedling | wt | 1.24 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.37 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.48 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.90 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.79 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.33 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.22 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.12 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.49 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.35 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.40 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.35 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.41 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.75 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.31 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.02 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.31 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.11 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.02 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.09 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.60 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.27 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.41 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.21 | MC |