| SRR4457249 | 2nd_leaf | DAH4 | 4.52 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.44 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.59 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.85 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.33 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.14 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.93 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.53 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.75 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.87 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.21 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.88 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.70 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.76 | MC |
| SRR358796 | callus | wt | 1.16 | MC |
| SRR358797 | callus | wt | 0.92 | MC |
| SRR5560729 | caryopsis | wild_type | 0.31 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.29 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.68 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.59 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.44 | MC |
| SRR7265400 | coleoptile | 2dA | 2.00 | MC |
| SRR7265401 | coleoptile | 2dA | 2.42 | MC |
| SRR7265402 | coleoptile | 2dA | 3.02 | MC |
| SRR7265403 | coleoptile | 2dN | 2.67 | MC |
| SRR7265404 | coleoptile | 2dN | 2.82 | MC |
| SRR7265405 | coleoptile | 2dN | 2.92 | MC |
| SRR7265413 | coleoptile | 4dA | 2.32 | MC |
| SRR7265414 | coleoptile | 4dA | 3.55 | MC |
| SRR7265415 | coleoptile | 4dN | 4.13 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.37 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.67 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.78 | MC |
| SRR7265388 | embryo | 12hA | 1.58 | MC |
| SRR7265389 | embryo | 12hA | 1.10 | MC |
| SRR7265390 | embryo | 12hA | 1.64 | MC |
| SRR7265391 | embryo | 12hN | 0.70 | MC |
| SRR7265392 | embryo | 12hN | 0.71 | MC |
| SRR7265393 | embryo | 12hN | 0.97 | MC |
| SRR7265394 | embryo | 24hA | 2.18 | MC |
| SRR7265395 | embryo | 24hA | 1.27 | MC |
| SRR7265396 | embryo | 24hA | 2.15 | MC |
| SRR7265397 | embryo | 24hN | 1.04 | MC |
| SRR7265398 | embryo | 24hN | 1.30 | MC |
| SRR7265399 | embryo | 24hN | 1.74 | MC |
| SRR2338866 | endosprem | control | 1.06 | MC |
| SRR2338867 | endosprem | control | 0.93 | MC |
| SRR2338868 | endosprem | high_temperature | 0.98 | MC |
| SRR2338869 | endosprem | high_temperature | 0.62 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.39 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.99 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.20 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.32 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.42 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.49 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.01 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.77 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.90 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.75 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.95 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.43 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.74 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.71 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.89 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.35 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.10 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.33 | MC |
| SRR1213691 | flower | wt | 0.51 | MC |
| SRR8240824 | leaf | wild_type | 2.27 | MC |
| SRR8240825 | leaf | wild_type | 1.72 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.71 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.06 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.56 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.80 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.25 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.36 | MC |
| SRR504365 | leaf | wt | 2.07 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.22 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.32 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.30 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.36 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.30 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.46 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.43 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.54 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.33 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.29 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.26 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.30 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.36 | MC |
| SRR1213693 | leaf | wt | 1.30 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.35 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 4.03 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.16 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.45 | MC |
| SRR5126147 | root | "mock,1_day" | 0.58 | MC |
| SRR5126148 | root | "mock,1_day" | 0.61 | MC |
| SRR5126149 | root | "mock,1_day" | 0.47 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.14 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.21 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.97 | MC |
| SRR5126153 | root | "mock,7_days" | 0.80 | MC |
| SRR5126155 | root | "mock,7_days" | 0.91 | MC |
| SRR5126157 | root | "mock,7_days" | 0.49 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.53 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.32 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.48 | MC |
| SRR5126165 | root | "mock,14_days" | 1.00 | MC |
| SRR5126167 | root | "mock,14_days" | 1.15 | MC |
| SRR5126169 | root | "mock,14_days" | 0.66 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.58 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.90 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.68 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.43 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.28 | MC |
| SRR1213695 | root | wt | 1.01 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.56 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.96 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.75 | MC |
| SRR6502094 | root | control | 0.95 | MC |
| SRR6502095 | root | control | 0.48 | MC |
| SRR6502096 | root | control | 0.71 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.61 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.87 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.99 | MC |
| SRR6502106 | root | control | 0.37 | MC |
| SRR6502107 | root | control | 0.35 | MC |
| SRR6502108 | root | control | 0.69 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.61 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.77 | MC |
| SRR6441554 | seedling | wild_type | 0.33 | MC |
| SRR6441555 | seedling | wild_type | 0.29 | MC |
| SRR2154086 | seedling | wt | 0.69 | MC |
| SRR2154083 | seedling | wt | 1.47 | MC |
| SRR2154087 | seedling | wt | 0.54 | MC |
| SRR3098741 | seedling | wt | 0.38 | MC |
| SRR3098742 | seedling | wt | 0.19 | MC |
| SRR3098743 | seedling | wt | 1.05 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.36 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.45 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.90 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.69 | MC |
| SRR358791 | seedling | wt | 0.65 | MC |
| SRR358792 | seedling | wt | 0.61 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.33 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.89 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.29 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.85 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.21 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.38 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.79 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.69 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.87 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.12 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.31 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.32 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.29 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.42 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.50 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.51 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.69 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.07 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.91 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.01 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.50 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.82 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.28 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.51 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.59 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.53 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.28 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.49 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.84 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.41 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.22 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.17 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.26 | MC |