| SRR4457252 | 2nd_leaf | DAH12 | 0.29 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.47 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.29 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.51 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.66 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.60 | MC |
| SRR8060836 | leaf | wild_type | 0.27 | MC |
| SRR8240824 | leaf | wild_type | 1.64 | MC |
| SRR8240825 | leaf | wild_type | 0.75 | MC |
| SRR8240818 | leaf | wild_type | 1.96 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.67 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.45 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.79 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.20 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.49 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.18 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.61 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.66 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.95 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.53 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.40 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.36 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.55 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.66 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.25 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.93 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.99 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.53 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.22 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.85 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.58 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.29 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.65 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.57 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.65 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.57 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.33 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.82 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.95 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.09 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.95 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.09 | MC |
| SRR1761530 | leaf | control | 0.95 | MC |
| SRR1761531 | leaf | control | 1.09 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.76 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.65 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.71 | MC |
| SRR6417967 | leaf | H2O_control | 2.76 | MC |
| SRR6417968 | leaf | H2O_control | 2.36 | MC |
| SRR6417969 | leaf | H2O_control | 3.28 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.95 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.28 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.63 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.39 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.34 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.93 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.42 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502088 | leaf | control | 1.17 | MC |
| SRR6502089 | leaf | control | 1.15 | MC |
| SRR6502090 | leaf | control | 1.52 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.65 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.41 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.17 | MC |
| SRR6502100 | leaf | control | 1.57 | MC |
| SRR6502101 | leaf | control | 1.47 | MC |
| SRR6502102 | leaf | control | 1.20 | MC |
| SRR5856927 | leaf | control | 2.13 | MC |
| SRR5856930 | leaf | salt | 1.71 | MC |
| SRR5856934 | leaf | control | 2.05 | MC |
| SRR5856938 | leaf | salt | 1.33 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.66 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.39 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.50 | MC |
| SRR8582888 | panicle | AM | 1.31 | MC |
| SRR5110432 | panicle | Dawn | 0.62 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.33 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.46 | MC |
| SRR5126155 | root | "mock,7_days" | 0.42 | MC |
| SRR5126157 | root | "mock,7_days" | 1.18 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.19 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.81 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.45 | MC |
| SRR5126169 | root | "mock,14_days" | 0.96 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.04 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.99 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.94 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.49 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.40 | MC |
| SRR1213695 | root | wt | 0.15 | MC |
| SRR4947499 | root | Al | 0.52 | MC |
| SRR6441555 | seedling | wild_type | 0.47 | MC |
| SRR2154082 | seedling | wt | 0.43 | MC |
| SRR3098741 | seedling | wt | 1.18 | MC |
| SRR3098742 | seedling | wt | 0.87 | MC |
| SRR3098743 | seedling | wt | 1.21 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.05 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.77 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.36 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.35 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.70 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.48 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.80 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.49 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.78 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.99 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.55 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.78 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.91 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.60 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.88 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.50 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.92 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.31 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.61 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.33 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.46 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.33 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.36 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.41 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.54 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.84 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.78 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.32 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.82 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.27 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.29 | MC |