| SRR4457249 | 2nd_leaf | DAH4 | 2.42 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.37 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.00 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.79 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.91 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.39 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.73 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.14 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.95 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.34 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.04 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.44 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.86 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.26 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.66 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.30 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.00 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.14 | MC |
| SRR3745125 | anther | wt | 1.32 | MC |
| SRR3745126 | anther | wt | 1.43 | MC |
| SRR6320473 | carpel | wt | 5.31 | MC |
| SRR6320498 | carpel | wt | 2.81 | MC |
| SRR5560727 | caryopsis | wild_type | 4.58 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.99 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.69 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.66 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.81 | MC |
| SRR7265400 | coleoptile | 2dA | 1.46 | MC |
| SRR7265401 | coleoptile | 2dA | 1.21 | MC |
| SRR7265402 | coleoptile | 2dA | 1.26 | MC |
| SRR7265403 | coleoptile | 2dN | 3.23 | MC |
| SRR7265404 | coleoptile | 2dN | 2.68 | MC |
| SRR7265405 | coleoptile | 2dN | 2.10 | MC |
| SRR7265406 | coleoptile | 3dA | 0.58 | MC |
| SRR7265407 | coleoptile | 3dA | 0.42 | MC |
| SRR7265408 | coleoptile | 3dA | 0.45 | MC |
| SRR7265409 | coleoptile | 3dN | 0.96 | MC |
| SRR7265410 | coleoptile | 3dN | 1.70 | MC |
| SRR7265411 | coleoptile | 3dN | 1.15 | MC |
| SRR7265413 | coleoptile | 4dA | 2.25 | MC |
| SRR7265414 | coleoptile | 4dA | 2.09 | MC |
| SRR7265416 | coleoptile | 4dN | 1.39 | MC |
| SRR7265417 | coleoptile | 4dN | 1.19 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.55 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.01 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.82 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.39 | MC |
| SRR7265376 | embryo | 1hA | 0.74 | MC |
| SRR7265377 | embryo | 1hA | 0.37 | MC |
| SRR7265378 | embryo | 1hA | 0.50 | MC |
| SRR7265379 | embryo | 1hN | 0.65 | MC |
| SRR7265380 | embryo | 1hN | 1.37 | MC |
| SRR7265381 | embryo | 1hN | 0.96 | MC |
| SRR7265382 | embryo | 3hA | 1.05 | MC |
| SRR7265385 | embryo | 3hN | 0.80 | MC |
| SRR7265386 | embryo | 3hN | 0.59 | MC |
| SRR7265387 | embryo | 3hN | 0.41 | MC |
| SRR7265388 | embryo | 12hA | 1.35 | MC |
| SRR7265389 | embryo | 12hA | 0.80 | MC |
| SRR7265390 | embryo | 12hA | 1.36 | MC |
| SRR7265391 | embryo | 12hN | 2.57 | MC |
| SRR7265392 | embryo | 12hN | 1.74 | MC |
| SRR7265393 | embryo | 12hN | 2.72 | MC |
| SRR7265394 | embryo | 24hA | 1.51 | MC |
| SRR7265395 | embryo | 24hA | 1.81 | MC |
| SRR7265396 | embryo | 24hA | 1.10 | MC |
| SRR7265397 | embryo | 24hN | 2.92 | MC |
| SRR7265398 | embryo | 24hN | 4.09 | MC |
| SRR7265399 | embryo | 24hN | 3.53 | MC |
| SRR2338867 | endosprem | control | 0.43 | MC |
| SRR2338868 | endosprem | high_temperature | 0.86 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.05 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.95 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.78 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.64 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.31 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.05 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.05 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.56 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.01 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.00 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.94 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.47 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.50 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.49 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.02 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.86 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.57 | MC |
| SRR8060835 | leaf | wild_type | 2.69 | MC |
| SRR8060836 | leaf | wild_type | 1.43 | MC |
| SRR8060837 | leaf | wild_type | 1.65 | MC |
| SRR8240824 | leaf | wild_type | 2.39 | MC |
| SRR8240825 | leaf | wild_type | 2.15 | MC |
| SRR8240826 | leaf | wild_type | 1.64 | MC |
| SRR8240818 | leaf | wild_type | 1.12 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.51 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.57 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.65 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.72 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.16 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.24 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.44 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.72 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.64 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.41 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.75 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.96 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.29 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.30 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.24 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.43 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.49 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.13 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.53 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.36 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.27 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.69 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.10 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.49 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.69 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.10 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.49 | MC |
| SRR1761528 | leaf | drought | 2.69 | MC |
| SRR1761530 | leaf | control | 4.10 | MC |
| SRR1761531 | leaf | control | 4.49 | MC |
| SRR504365 | leaf | wt | 2.88 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.52 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.64 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.66 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.65 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.89 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.39 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.75 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.12 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.99 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.14 | MC |
| SRR6502088 | leaf | control | 2.08 | MC |
| SRR6502089 | leaf | control | 2.33 | MC |
| SRR6502090 | leaf | control | 1.43 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.63 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.94 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.19 | MC |
| SRR6502100 | leaf | control | 1.32 | MC |
| SRR6502101 | leaf | control | 1.21 | MC |
| SRR6502102 | leaf | control | 1.82 | MC |
| SRR5856927 | leaf | control | 0.22 | MC |
| SRR5856928 | leaf | control | 0.26 | MC |
| SRR5856933 | leaf | control | 0.47 | MC |
| SRR5856934 | leaf | control | 0.24 | MC |
| SRR5856935 | leaf | control | 0.34 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.63 | MC |
| SRR6168979 | leaf | none (control) | 0.98 | MC |
| SRR6168980 | leaf | none (control) | 0.36 | MC |
| SRR8582888 | panicle | AM | 1.79 | MC |
| SRR8582889 | panicle | AM | 1.31 | MC |
| SRR8582890 | panicle | AM | 1.37 | MC |
| SRR8582891 | panicle | PM | 2.00 | MC |
| SRR8582892 | panicle | PM | 2.15 | MC |
| SRR8582893 | panicle | PM | 2.68 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.76 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.96 | MC |
| SRR5126157 | root | "mock,7_days" | 4.15 | MC |
| SRR5126165 | root | "mock,14_days" | 4.29 | MC |
| SRR2154085 | seedling | wt | 4.26 | MC |
| SRR3098741 | seedling | wt | 2.43 | MC |
| SRR3098742 | seedling | wt | 1.08 | MC |
| SRR3098743 | seedling | wt | 1.49 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.23 | MC |
| SRR1944583 | seedling | no_treatment | 3.16 | MC |
| SRR358791 | seedling | wt | 3.99 | MC |
| SRR358792 | seedling | wt | 2.45 | MC |
| SRR358793 | seedling | wt | 4.22 | MC |
| SRR358794 | seedling | wt | 4.76 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.81 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.27 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.16 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.85 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.14 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 4.36 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.14 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.69 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.12 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.52 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.22 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.30 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.36 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.12 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.98 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.84 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.91 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.18 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.45 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.47 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.08 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.76 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.80 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.71 | MC |