| SRR4457256 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.55 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.46 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.42 | MC |
| SRR4947495 | root | control | 0.67 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.56 | MC |
| SRR7265401 | coleoptile | 2dA | 2.08 | MC |
| SRR7265402 | coleoptile | 2dA | 2.84 | MC |
| SRR7265403 | coleoptile | 2dN | 3.71 | MC |
| SRR7265406 | coleoptile | 3dA | 1.66 | MC |
| SRR7265407 | coleoptile | 3dA | 1.20 | MC |
| SRR7265409 | coleoptile | 3dN | 3.46 | MC |
| SRR7265411 | coleoptile | 3dN | 2.87 | MC |
| SRR7265412 | coleoptile | 4dA | 0.67 | MC |
| SRR7265413 | coleoptile | 4dA | 2.37 | MC |
| SRR7265414 | coleoptile | 4dA | 2.92 | MC |
| SRR7265415 | coleoptile | 4dN | 2.06 | MC |
| SRR7265416 | coleoptile | 4dN | 2.71 | MC |
| SRR7265417 | coleoptile | 4dN | 4.03 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.54 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.82 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.95 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.03 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.75 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.82 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.36 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.68 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.97 | MC |
| SRR7265376 | embryo | 1hA | 2.26 | MC |
| SRR7265377 | embryo | 1hA | 2.71 | MC |
| SRR7265378 | embryo | 1hA | 1.10 | MC |
| SRR7265379 | embryo | 1hN | 0.79 | MC |
| SRR7265380 | embryo | 1hN | 1.53 | MC |
| SRR7265381 | embryo | 1hN | 2.09 | MC |
| SRR7265382 | embryo | 3hA | 3.80 | MC |
| SRR7265383 | embryo | 3hA | 2.34 | MC |
| SRR7265384 | embryo | 3hA | 2.11 | MC |
| SRR7265385 | embryo | 3hN | 2.56 | MC |
| SRR7265386 | embryo | 3hN | 2.23 | MC |
| SRR7265387 | embryo | 3hN | 1.72 | MC |
| SRR7265390 | embryo | 12hA | 4.22 | MC |
| SRR7265392 | embryo | 12hN | 3.93 | MC |
| SRR7265394 | embryo | 24hA | 3.98 | MC |
| SRR7265395 | embryo | 24hA | 4.76 | MC |
| SRR7265396 | embryo | 24hA | 4.63 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.29 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.52 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.90 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.72 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.50 | MC |
| SRR8060835 | leaf | wild_type | 0.24 | MC |
| SRR8060836 | leaf | wild_type | 0.35 | MC |
| SRR8240826 | leaf | wild_type | 0.56 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.56 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.56 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.43 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.68 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.30 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.04 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.47 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.37 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.52 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.73 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.92 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.27 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.51 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.48 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.39 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.68 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.05 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.35 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.29 | MC |
| SRR1213692 | leaf | wt | 0.31 | MC |
| SRR1213693 | leaf | wt | 0.22 | MC |
| SRR6502100 | leaf | control | 0.52 | MC |
| SRR5856935 | leaf | control | 0.23 | MC |
| SRR5856936 | leaf | salt | 0.15 | MC |
| SRR5856937 | leaf | salt | 0.22 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR5110432 | panicle | Dawn | 0.68 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.72 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.41 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.82 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.65 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.17 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.64 | MC |
| SRR1633182 | panicle | WT | 1.84 | MC |
| SRR1633185 | panicle | WT | 1.86 | MC |
| SRR5126147 | root | "mock,1_day" | 0.30 | MC |
| SRR5126148 | root | "mock,1_day" | 0.32 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.42 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.44 | MC |
| SRR5126155 | root | "mock,7_days" | 0.60 | MC |
| SRR5126165 | root | "mock,14_days" | 0.60 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.41 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.51 | MC |
| SRR4947480 | root | control | 0.63 | MC |
| SRR4947482 | root | Al | 0.40 | MC |
| SRR4947484 | root | Al | 0.90 | MC |
| SRR4947499 | root | Al | 0.54 | MC |
| SRR4947502 | root | control | 0.53 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.34 | MC |
| SRR6502096 | root | control | 0.92 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.67 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.93 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.37 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.27 | MC |
| SRR6441554 | seedling | wild_type | 0.57 | MC |
| SRR6441555 | seedling | wild_type | 0.29 | MC |
| SRR2154084 | seedling | wt | 0.32 | MC |
| SRR3098741 | seedling | wt | 0.26 | MC |
| SRR3098742 | seedling | wt | 0.32 | MC |
| SRR3098743 | seedling | wt | 0.36 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.48 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.06 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.39 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.31 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.64 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.83 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.42 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.37 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.99 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.76 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.67 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.77 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.93 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.56 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.65 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.81 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.04 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.48 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.58 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.61 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.78 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.48 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.77 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.46 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.75 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |