| SRR5560727 | caryopsis | wild_type | 3.46 | MC |
| SRR4947495 | root | control | 3.98 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.45 | MC |
| SRR7265412 | coleoptile | 4dA | 1.20 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.93 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.59 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.86 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.74 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.80 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.03 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.44 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.67 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.34 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.70 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.62 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.74 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.95 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.75 | MC |
| SRR2338867 | endosprem | control | 1.40 | MC |
| SRR2338868 | endosprem | high_temperature | 2.25 | MC |
| SRR2338869 | endosprem | high_temperature | 2.68 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.21 | MC |
| SRR1213691 | flower | wt | 3.10 | MC |
| SRR8060836 | leaf | wild_type | 0.30 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.25 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.91 | MC |
| SRR5856927 | leaf | control | 1.49 | MC |
| SRR5856928 | leaf | control | 1.76 | MC |
| SRR5856929 | leaf | control | 1.61 | MC |
| SRR5856930 | leaf | salt | 1.86 | MC |
| SRR5856931 | leaf | salt | 1.31 | MC |
| SRR5856932 | leaf | salt | 0.92 | MC |
| SRR5856933 | leaf | control | 1.13 | MC |
| SRR5856934 | leaf | control | 2.07 | MC |
| SRR5856935 | leaf | control | 1.78 | MC |
| SRR5856936 | leaf | salt | 1.46 | MC |
| SRR5856937 | leaf | salt | 1.75 | MC |
| SRR6168973 | leaf | none (control) | 1.62 | MC |
| SRR6168974 | leaf | none (control) | 3.08 | MC |
| SRR6168975 | leaf | none (control) | 1.31 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.55 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.48 | MC |
| SRR6168980 | leaf | none (control) | 1.20 | MC |
| SRR5110429 | panicle | Dawn | 0.86 | MC |
| SRR5110431 | panicle | Dawn | 0.96 | MC |
| SRR5110432 | panicle | Dawn | 3.34 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.86 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.03 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.69 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.61 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.42 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.12 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.65 | MC |
| SRR5110445 | panicle | Dusk | 2.66 | MC |
| SRR5110446 | panicle | Dusk | 1.57 | MC |
| SRR5110447 | panicle | Dusk | 3.75 | MC |
| SRR5110448 | panicle | Dusk | 4.10 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.60 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.06 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.77 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.54 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.07 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.90 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.38 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.49 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.33 | MC |
| SRR5126149 | root | "mock,1_day" | 4.57 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 4.03 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.48 | MC |
| SRR5126157 | root | "mock,7_days" | 3.73 | MC |
| SRR5126165 | root | "mock,14_days" | 3.20 | MC |
| SRR5126169 | root | "mock,14_days" | 4.50 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.12 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.65 | MC |
| SRR1213694 | root | wt | 2.37 | MC |
| SRR4947478 | root | control | 4.02 | MC |
| SRR4947479 | root | control | 4.01 | MC |
| SRR4947485 | root | Al | 4.29 | MC |
| SRR4947489 | root | control | 4.94 | MC |
| SRR4947490 | root | Al | 1.23 | MC |
| SRR4947491 | root | Al | 1.81 | MC |
| SRR4947493 | root | Al | 3.35 | MC |
| SRR4947497 | root | control | 5.91 | MC |
| SRR4947498 | root | Al | 1.73 | MC |
| SRR4947499 | root | Al | 2.99 | MC |
| SRR4947502 | root | control | 4.62 | MC |
| SRR4947506 | root | Al | 4.03 | MC |
| SRR6502095 | root | control | 4.06 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.87 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.76 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.65 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.76 | MC |
| SRR6441554 | seedling | wild_type | 0.60 | MC |
| SRR6441555 | seedling | wild_type | 0.58 | MC |
| SRR2154086 | seedling | wt | 2.02 | MC |
| SRR2154082 | seedling | wt | 1.63 | MC |
| SRR2154083 | seedling | wt | 1.39 | MC |
| SRR2154084 | seedling | wt | 2.70 | MC |
| SRR2154085 | seedling | wt | 2.44 | MC |
| SRR2154087 | seedling | wt | 1.64 | MC |
| SRR3098741 | seedling | wt | 0.24 | MC |
| SRR3098742 | seedling | wt | 1.13 | MC |
| SRR3098743 | seedling | wt | 0.91 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.45 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.37 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.03 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.55 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.08 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.03 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.80 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.81 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.96 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.69 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.61 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.00 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.60 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.29 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.41 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.95 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.17 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.59 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.68 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.28 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.70 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.52 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.73 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.24 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.96 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.90 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.70 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.98 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.96 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.10 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.90 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.64 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.86 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.90 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.06 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 5.77 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.05 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.40 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.24 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.27 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 4.08 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.19 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.16 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.37 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 8.50 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.18 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.93 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.52 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.96 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 6.28 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.30 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.63 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.34 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.51 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.09 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.15 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.43 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.96 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.71 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.69 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.95 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.63 | MC |