| SRR4457251 | 2nd_leaf | DAH4 | 0.28 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.30 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.54 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.40 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.24 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.41 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.50 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.81 | MC |
| SRR3745126 | anther | wt | 5.27 | MC |
| SRR3745127 | anther | wt | 2.36 | MC |
| SRR6320498 | carpel | wt | 5.45 | MC |
| SRR5560727 | caryopsis | wild_type | 2.46 | MC |
| SRR5560728 | caryopsis | wild_type | 4.90 | MC |
| SRR5560729 | caryopsis | wild_type | 5.07 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.46 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.75 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.56 | MC |
| SRR4947495 | root | control | 3.75 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.55 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.45 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.34 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.29 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.13 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.99 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.85 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.18 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.66 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.97 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.15 | MC |
| SRR7265386 | embryo | 3hN | 0.57 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.21 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.21 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.43 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.27 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.62 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.33 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.41 | MC |
| SRR8060835 | leaf | wild_type | 0.62 | MC |
| SRR8060836 | leaf | wild_type | 0.57 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.26 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.32 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.50 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.72 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.47 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.28 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.36 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.34 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.77 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.84 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.18 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.91 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.38 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.70 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.09 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.77 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.75 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.70 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.35 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.98 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.27 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.71 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.38 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.90 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.03 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.55 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.06 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.82 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.05 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.91 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.26 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.44 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.91 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.26 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.44 | MC |
| SRR1761528 | leaf | drought | 2.91 | MC |
| SRR1761529 | leaf | drought | 3.26 | MC |
| SRR1761531 | leaf | control | 1.44 | MC |
| SRR504365 | leaf | wt | 1.93 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.56 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.36 | MC |
| SRR6417967 | leaf | H2O_control | 1.35 | MC |
| SRR6417968 | leaf | H2O_control | 2.60 | MC |
| SRR6417969 | leaf | H2O_control | 2.92 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.99 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.47 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.59 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.45 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.60 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.81 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.04 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.44 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.85 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.25 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.87 | MC |
| SRR6502100 | leaf | control | 0.97 | MC |
| SRR5856927 | leaf | control | 2.25 | MC |
| SRR5856928 | leaf | control | 2.25 | MC |
| SRR5856929 | leaf | control | 2.16 | MC |
| SRR5856930 | leaf | salt | 1.56 | MC |
| SRR5856932 | leaf | salt | 1.81 | MC |
| SRR5856938 | leaf | salt | 1.65 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.14 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.52 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 7.74 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.83 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.55 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.76 | MC |
| SRR6168973 | leaf | none (control) | 2.85 | MC |
| SRR6168974 | leaf | none (control) | 3.44 | MC |
| SRR6168975 | leaf | none (control) | 3.52 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.77 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.47 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.86 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.06 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.89 | MC |
| SRR8582888 | panicle | AM | 0.28 | MC |
| SRR8582889 | panicle | AM | 0.16 | MC |
| SRR8582890 | panicle | AM | 0.85 | MC |
| SRR8582891 | panicle | PM | 0.51 | MC |
| SRR4947496 | root | control | 1.36 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.62 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.22 | MC |
| SRR5126147 | root | "mock,1_day" | 1.21 | MC |
| SRR5126148 | root | "mock,1_day" | 1.55 | MC |
| SRR5126149 | root | "mock,1_day" | 2.07 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.95 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.77 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.91 | MC |
| SRR5126153 | root | "mock,7_days" | 3.28 | MC |
| SRR5126155 | root | "mock,7_days" | 2.62 | MC |
| SRR5126157 | root | "mock,7_days" | 1.23 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.99 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.61 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.97 | MC |
| SRR5126165 | root | "mock,14_days" | 3.17 | MC |
| SRR5126167 | root | "mock,14_days" | 1.93 | MC |
| SRR5126169 | root | "mock,14_days" | 2.13 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.74 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.54 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.43 | MC |
| SRR4947479 | root | control | 3.32 | MC |
| SRR4947480 | root | control | 1.69 | MC |
| SRR4947481 | root | control | 1.35 | MC |
| SRR4947482 | root | Al | 3.02 | MC |
| SRR4947483 | root | Al | 3.51 | MC |
| SRR4947484 | root | Al | 1.34 | MC |
| SRR4947485 | root | Al | 3.02 | MC |
| SRR4947487 | root | control | 2.17 | MC |
| SRR4947488 | root | control | 1.00 | MC |
| SRR4947489 | root | control | 0.74 | MC |
| SRR4947492 | root | Al | 4.47 | MC |
| SRR4947494 | root | control | 2.05 | MC |
| SRR4947501 | root | Al | 3.24 | MC |
| SRR4947502 | root | control | 4.52 | MC |
| SRR4947503 | root | control | 3.78 | MC |
| SRR4947504 | root | control | 1.50 | MC |
| SRR4947505 | root | control | 0.82 | MC |
| SRR4947506 | root | Al | 3.16 | MC |
| SRR4947507 | root | Al | 5.40 | MC |
| SRR4947508 | root | Al | 3.00 | MC |
| SRR4947509 | root | Al | 1.38 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.51 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.23 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.56 | MC |
| SRR6502106 | root | control | 2.35 | MC |
| SRR6502107 | root | control | 1.29 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.29 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.01 | MC |
| SRR6441554 | seedling | wild_type | 2.51 | MC |
| SRR6441555 | seedling | wild_type | 2.00 | MC |
| SRR2154086 | seedling | wt | 2.93 | MC |
| SRR2154082 | seedling | wt | 1.88 | MC |
| SRR2154085 | seedling | wt | 2.81 | MC |
| SRR2154087 | seedling | wt | 0.94 | MC |
| SRR3098741 | seedling | wt | 1.35 | MC |
| SRR3098742 | seedling | wt | 0.92 | MC |
| SRR3098743 | seedling | wt | 1.27 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.90 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.47 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.63 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.04 | MC |
| SRR358791 | seedling | wt | 7.78 | MC |
| SRR358792 | seedling | wt | 6.53 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.74 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.78 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.41 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.77 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.77 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.65 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.12 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.15 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.30 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.92 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.86 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.07 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.66 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.67 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.44 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.22 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.20 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.01 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.03 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.78 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.83 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.91 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.13 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.85 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.58 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.28 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.22 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.12 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.27 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.56 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.00 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.41 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.00 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.07 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.86 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.89 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.89 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.65 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.46 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.42 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.50 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.20 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.68 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.75 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.01 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.14 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.38 | MC |