| SRR4457251 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR3745125 | anther | wt | 1.26 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.86 | MC |
| SRR4947495 | root | control | 1.47 | MC |
| SRR7265400 | coleoptile | 2dA | 0.49 | MC |
| SRR7265402 | coleoptile | 2dA | 0.81 | MC |
| SRR7265407 | coleoptile | 3dA | 0.37 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR7265382 | embryo | 3hA | 0.55 | MC |
| SRR2338868 | endosprem | high_temperature | 0.41 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.19 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.34 | MC |
| SRR1213691 | flower | wt | 0.60 | MC |
| SRR8060837 | leaf | wild_type | 0.29 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.75 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.50 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.50 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.33 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.68 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.65 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.03 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.50 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.91 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.56 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.52 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.84 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.52 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.61 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.84 | MC |
| SRR1761528 | leaf | drought | 2.42 | MC |
| SRR1761529 | leaf | drought | 0.74 | MC |
| SRR1761531 | leaf | control | 0.47 | MC |
| SRR504365 | leaf | wt | 0.20 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.70 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.60 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.26 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.26 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.34 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.57 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.44 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.81 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.48 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.53 | MC |
| SRR5856928 | leaf | control | 0.32 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.55 | MC |
| SRR5110429 | panicle | Dawn | 1.34 | MC |
| SRR5110432 | panicle | Dawn | 1.18 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.20 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.17 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.78 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.00 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.34 | MC |
| SRR5110446 | panicle | Dusk | 2.02 | MC |
| SRR5110448 | panicle | Dusk | 2.76 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.12 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.76 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.69 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.70 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.60 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.70 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.45 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.01 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.20 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.28 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.32 | MC |
| SRR1633182 | panicle | WT | 4.75 | MC |
| SRR1633185 | panicle | WT | 5.06 | MC |
| SRR5126147 | root | "mock,1_day" | 0.62 | MC |
| SRR5126148 | root | "mock,1_day" | 1.94 | MC |
| SRR5126149 | root | "mock,1_day" | 0.67 | MC |
| SRR5126153 | root | "mock,7_days" | 1.05 | MC |
| SRR5126155 | root | "mock,7_days" | 0.31 | MC |
| SRR5126157 | root | "mock,7_days" | 0.97 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.40 | MC |
| SRR5126165 | root | "mock,14_days" | 0.63 | MC |
| SRR5126167 | root | "mock,14_days" | 0.79 | MC |
| SRR5126169 | root | "mock,14_days" | 0.37 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.36 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.73 | MC |
| SRR4947479 | root | control | 1.38 | MC |
| SRR4947482 | root | Al | 0.56 | MC |
| SRR4947483 | root | Al | 1.97 | MC |
| SRR4947487 | root | control | 1.22 | MC |
| SRR4947488 | root | control | 0.65 | MC |
| SRR4947490 | root | Al | 1.31 | MC |
| SRR4947491 | root | Al | 0.86 | MC |
| SRR4947494 | root | control | 0.86 | MC |
| SRR4947498 | root | Al | 2.08 | MC |
| SRR4947499 | root | Al | 1.06 | MC |
| SRR4947503 | root | control | 1.45 | MC |
| SRR4947507 | root | Al | 2.44 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.78 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.65 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.63 | MC |
| SRR6502095 | root | control | 0.69 | MC |
| SRR6502096 | root | control | 0.52 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.81 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.59 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.74 | MC |
| SRR6502106 | root | control | 0.89 | MC |
| SRR6502107 | root | control | 0.41 | MC |
| SRR6502108 | root | control | 0.58 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.19 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.39 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.18 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.49 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.80 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.42 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.88 | MC |
| SRR1740430 | root_meristematic_zone | wt | 3.07 | MC |
| SRR2154086 | seedling | wt | 2.03 | MC |
| SRR2154083 | seedling | wt | 0.87 | MC |
| SRR2154085 | seedling | wt | 3.75 | MC |
| SRR2154087 | seedling | wt | 0.97 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.10 | MC |
| SRR1944583 | seedling | no_treatment | 0.59 | MC |
| SRR358794 | seedling | wt | 1.18 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.45 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.27 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.99 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.65 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.36 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.11 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.68 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.88 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.19 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.57 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.16 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.81 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.05 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.52 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.54 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.80 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.41 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.14 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.95 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.25 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.13 | MC |