| SRR3745126 | anther | wt | 4.24 | MC |
| SRR3745127 | anther | wt | 4.25 | MC |
| SRR358795 | callus | wt | 9.12 | MC |
| SRR5560727 | caryopsis | wild_type | 2.34 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.66 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.40 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.62 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.84 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.40 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.83 | MC |
| SRR2338868 | endosprem | high_temperature | 2.50 | MC |
| SRR8240818 | leaf | wild_type | 0.32 | MC |
| SRR8240820 | leaf | wild_type | 0.34 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.96 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.50 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.51 | MC |
| SRR6417967 | leaf | H2O_control | 1.49 | MC |
| SRR6417968 | leaf | H2O_control | 1.35 | MC |
| SRR6417969 | leaf | H2O_control | 1.14 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.08 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.33 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.93 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.59 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.17 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.34 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.86 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.71 | MC |
| SRR1213692 | leaf | wt | 4.05 | MC |
| SRR1213693 | leaf | wt | 3.21 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.00 | MC |
| SRR6502089 | leaf | control | 2.93 | MC |
| SRR6502090 | leaf | control | 3.87 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.66 | MC |
| SRR6502100 | leaf | control | 3.33 | MC |
| SRR6502101 | leaf | control | 4.18 | MC |
| SRR6502102 | leaf | control | 3.52 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 3.07 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.26 | MC |
| SRR6168979 | leaf | none (control) | 0.96 | MC |
| SRR6168980 | leaf | none (control) | 1.36 | MC |
| SRR6168981 | leaf | none (control) | 0.64 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.83 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.85 | MC |
| SRR8582893 | panicle | PM | 3.69 | MC |
| SRR4947496 | root | control | 2.10 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.83 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.72 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.53 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.38 | MC |
| SRR1213694 | root | wt | 2.11 | MC |
| SRR4947480 | root | control | 1.08 | MC |
| SRR4947481 | root | control | 4.12 | MC |
| SRR4947484 | root | Al | 2.31 | MC |
| SRR4947485 | root | Al | 1.60 | MC |
| SRR4947488 | root | control | 2.69 | MC |
| SRR4947489 | root | control | 2.19 | MC |
| SRR4947492 | root | Al | 2.04 | MC |
| SRR4947493 | root | Al | 2.59 | MC |
| SRR4947497 | root | control | 1.18 | MC |
| SRR4947500 | root | Al | 1.25 | MC |
| SRR4947501 | root | Al | 3.03 | MC |
| SRR4947504 | root | control | 2.30 | MC |
| SRR4947505 | root | control | 1.74 | MC |
| SRR4947508 | root | Al | 2.93 | MC |
| SRR4947509 | root | Al | 1.44 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.63 | MC |
| SRR6502094 | root | control | 3.16 | MC |
| SRR6502095 | root | control | 1.73 | MC |
| SRR6502096 | root | control | 2.31 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.41 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.53 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.57 | MC |
| SRR6502106 | root | control | 3.99 | MC |
| SRR6502108 | root | control | 4.50 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.42 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.53 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.70 | MC |
| SRR1740431 | root_elongation_zone | wt | 2.36 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.84 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.15 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.27 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.73 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.46 | MC |
| SRR6441554 | seedling | wild_type | 2.91 | MC |
| SRR6441555 | seedling | wild_type | 2.18 | MC |
| SRR2154086 | seedling | wt | 4.28 | MC |
| SRR2154083 | seedling | wt | 2.54 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.20 | MC |
| SRR358792 | seedling | wt | 7.11 | MC |
| SRR358794 | seedling | wt | 0.75 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.22 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.38 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.26 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.04 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.90 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.43 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.43 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.35 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.93 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.97 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.19 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.53 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.77 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.60 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.66 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.74 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.97 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.71 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.53 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.76 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.78 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.75 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.11 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.13 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.17 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.86 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.34 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.04 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.66 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.00 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.29 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 4.63 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.86 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.06 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 0.88 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.24 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.48 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.58 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.76 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.11 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.37 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.58 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.70 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.80 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.85 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.84 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 7.62 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 5.22 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.48 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.89 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.40 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.38 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.13 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.12 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.29 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.93 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.95 | MC |