| SRR3745125 | anther | wt | 1.32 | MC |
| SRR3745126 | anther | wt | 2.34 | MC |
| SRR3745127 | anther | wt | 1.93 | MC |
| SRR358795 | callus | wt | 6.72 | MC |
| SRR358796 | callus | wt | 6.35 | MC |
| SRR358797 | callus | wt | 4.75 | MC |
| SRR358798 | callus | wt | 5.96 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.69 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.19 | MC |
| SRR2338866 | endosprem | control | 1.88 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.64 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.95 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.38 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.87 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.01 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.01 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.81 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.30 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.25 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.80 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.81 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.75 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.86 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.91 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.42 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.16 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.10 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.92 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.81 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.00 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.20 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.41 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.60 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.71 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.24 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.60 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.71 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.24 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.51 | MC |
| SRR1761528 | leaf | drought | 4.60 | MC |
| SRR1761529 | leaf | drought | 4.71 | MC |
| SRR1761530 | leaf | control | 2.24 | MC |
| SRR1761531 | leaf | control | 1.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.22 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.71 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.15 | MC |
| SRR6417967 | leaf | H2O_control | 1.86 | MC |
| SRR6417968 | leaf | H2O_control | 1.86 | MC |
| SRR6417969 | leaf | H2O_control | 2.08 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.60 | MC |
| SRR1213692 | leaf | wt | 4.10 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.20 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.56 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.69 | MC |
| SRR6502088 | leaf | control | 3.68 | MC |
| SRR6502089 | leaf | control | 3.56 | MC |
| SRR6502090 | leaf | control | 3.12 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.85 | MC |
| SRR6502101 | leaf | control | 3.66 | MC |
| SRR6168979 | leaf | none (control) | 0.28 | MC |
| SRR5126147 | root | "mock,1_day" | 1.95 | MC |
| SRR5126148 | root | "mock,1_day" | 1.35 | MC |
| SRR5126149 | root | "mock,1_day" | 2.89 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.45 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.68 | MC |
| SRR1213694 | root | wt | 2.86 | MC |
| SRR4947492 | root | Al | 4.12 | MC |
| SRR4947500 | root | Al | 4.04 | MC |
| SRR4947508 | root | Al | 2.00 | MC |
| SRR4947509 | root | Al | 5.05 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.40 | MC |
| SRR6502095 | root | control | 3.30 | MC |
| SRR6502096 | root | control | 3.91 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.57 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.12 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.93 | MC |
| SRR6502106 | root | control | 3.42 | MC |
| SRR6502107 | root | control | 3.60 | MC |
| SRR6502108 | root | control | 2.41 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.64 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.39 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.30 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.85 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.73 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.51 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.09 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.04 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.26 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.37 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.53 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.04 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 5.66 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 5.72 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 4.28 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 4.09 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.05 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 5.95 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.25 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.97 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.72 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 6.55 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.30 | MC |