| SRR4457249 | 2nd_leaf | DAH4 | 1.17 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.10 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.52 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.76 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.18 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.67 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.91 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.41 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.38 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.40 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.66 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.74 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.53 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.92 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.47 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.93 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.02 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.55 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.07 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.49 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.32 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.97 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.59 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.15 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.57 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.77 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.82 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.09 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.93 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.29 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.49 | MC |
| SRR8240825 | leaf | wild_type | 0.28 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.75 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.84 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.46 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.48 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.79 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.53 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.85 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.75 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.81 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.36 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.44 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.40 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.90 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.46 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.43 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.04 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.51 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.73 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.83 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.98 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.44 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.52 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.45 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.77 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.59 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.60 | MC |
| SRR1761529 | leaf | drought | 0.59 | MC |
| SRR504365 | leaf | wt | 0.44 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.45 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.45 | MC |
| SRR6417969 | leaf | H2O_control | 0.50 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.29 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.61 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.54 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.32 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.36 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.55 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.23 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.43 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.37 | MC |
| SRR1213692 | leaf | wt | 0.87 | MC |
| SRR1213693 | leaf | wt | 0.85 | MC |
| SRR5856936 | leaf | salt | 0.14 | MC |
| SRR5856937 | leaf | salt | 0.30 | MC |
| SRR6168981 | leaf | none (control) | 0.31 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.24 | MC |
| SRR8582888 | panicle | AM | 0.81 | MC |
| SRR8582889 | panicle | AM | 0.35 | MC |
| SRR8582890 | panicle | AM | 0.27 | MC |
| SRR8582891 | panicle | PM | 0.44 | MC |
| SRR8582892 | panicle | PM | 0.71 | MC |
| SRR8582893 | panicle | PM | 0.22 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.92 | MC |
| SRR5126149 | root | "mock,1_day" | 0.53 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.32 | MC |
| SRR5126155 | root | "mock,7_days" | 0.29 | MC |
| SRR5126157 | root | "mock,7_days" | 0.63 | MC |
| SRR5126167 | root | "mock,14_days" | 0.49 | MC |
| SRR1213694 | root | wt | 0.85 | MC |
| SRR1213695 | root | wt | 1.91 | MC |
| SRR4947505 | root | control | 0.61 | MC |
| SRR2154086 | seedling | wt | 0.72 | MC |
| SRR2154085 | seedling | wt | 0.53 | MC |
| SRR2154087 | seedling | wt | 0.39 | MC |
| SRR3098741 | seedling | wt | 0.28 | MC |
| SRR3098742 | seedling | wt | 0.16 | MC |
| SRR3098743 | seedling | wt | 0.52 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.49 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.66 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.72 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.96 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.38 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.60 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.37 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.77 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.33 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.39 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.51 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.48 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.95 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.90 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.74 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.46 | MC |