| SRR4457249 | 2nd_leaf | DAH4 | 3.89 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.08 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.04 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.05 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.28 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.68 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.53 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.31 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.81 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.86 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.20 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.11 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.40 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.61 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.78 | MC |
| SRR7265403 | coleoptile | 2dN | 1.27 | MC |
| SRR7265404 | coleoptile | 2dN | 1.11 | MC |
| SRR7265405 | coleoptile | 2dN | 1.68 | MC |
| SRR7265406 | coleoptile | 3dA | 2.96 | MC |
| SRR7265408 | coleoptile | 3dA | 2.19 | MC |
| SRR7265409 | coleoptile | 3dN | 0.42 | MC |
| SRR7265412 | coleoptile | 4dA | 0.91 | MC |
| SRR7265414 | coleoptile | 4dA | 1.75 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.42 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.29 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.47 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.07 | MC |
| SRR7265381 | embryo | 1hN | 0.32 | MC |
| SRR7265388 | embryo | 12hA | 2.96 | MC |
| SRR7265389 | embryo | 12hA | 2.92 | MC |
| SRR7265390 | embryo | 12hA | 2.06 | MC |
| SRR7265391 | embryo | 12hN | 1.58 | MC |
| SRR7265392 | embryo | 12hN | 1.37 | MC |
| SRR7265393 | embryo | 12hN | 1.83 | MC |
| SRR7265394 | embryo | 24hA | 3.82 | MC |
| SRR7265395 | embryo | 24hA | 4.94 | MC |
| SRR7265396 | embryo | 24hA | 4.46 | MC |
| SRR7265397 | embryo | 24hN | 2.06 | MC |
| SRR7265398 | embryo | 24hN | 0.64 | MC |
| SRR7265399 | embryo | 24hN | 1.34 | MC |
| SRR4457231 | flag_leaf | DAH4 | 3.14 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.90 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.87 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.28 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.12 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.42 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.76 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.13 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.21 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.74 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.63 | MC |
| SRR8060835 | leaf | wild_type | 0.64 | MC |
| SRR8060836 | leaf | wild_type | 0.72 | MC |
| SRR8060837 | leaf | wild_type | 0.51 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.50 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.67 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.38 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.27 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.27 | MC |
| SRR1761531 | leaf | control | 1.27 | MC |
| SRR504365 | leaf | wt | 1.72 | MC |
| SRR6417969 | leaf | H2O_control | 0.44 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.44 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.66 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.88 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.31 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR1213692 | leaf | wt | 0.61 | MC |
| SRR1213693 | leaf | wt | 0.48 | MC |
| SRR5856933 | leaf | control | 0.37 | MC |
| SRR5856934 | leaf | control | 0.43 | MC |
| SRR5856936 | leaf | salt | 0.16 | MC |
| SRR5856938 | leaf | salt | 0.15 | MC |
| SRR5110429 | panicle | Dawn | 0.65 | MC |
| SRR4947496 | root | control | 2.04 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.60 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.43 | MC |
| SRR5126148 | root | "mock,1_day" | 0.49 | MC |
| SRR5126149 | root | "mock,1_day" | 1.60 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.59 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.67 | MC |
| SRR5126153 | root | "mock,7_days" | 1.01 | MC |
| SRR5126155 | root | "mock,7_days" | 1.38 | MC |
| SRR5126157 | root | "mock,7_days" | 1.77 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.13 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.82 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.33 | MC |
| SRR5126165 | root | "mock,14_days" | 1.43 | MC |
| SRR5126167 | root | "mock,14_days" | 1.01 | MC |
| SRR5126169 | root | "mock,14_days" | 1.99 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.11 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.27 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.45 | MC |
| SRR1213694 | root | wt | 1.04 | MC |
| SRR1213695 | root | wt | 0.49 | MC |
| SRR4947482 | root | Al | 2.18 | MC |
| SRR4947489 | root | control | 1.13 | MC |
| SRR4947490 | root | Al | 1.48 | MC |
| SRR4947492 | root | Al | 1.74 | MC |
| SRR4947493 | root | Al | 1.06 | MC |
| SRR4947500 | root | Al | 0.86 | MC |
| SRR4947501 | root | Al | 1.00 | MC |
| SRR4947502 | root | control | 1.11 | MC |
| SRR4947503 | root | control | 1.55 | MC |
| SRR4947504 | root | control | 1.56 | MC |
| SRR4947506 | root | Al | 1.09 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.93 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.71 | MC |
| SRR6502094 | root | control | 1.00 | MC |
| SRR6502095 | root | control | 1.92 | MC |
| SRR6502096 | root | control | 1.80 | MC |
| SRR6502103 | root | 100 mM NaCl | 2.76 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.79 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.14 | MC |
| SRR6502106 | root | control | 3.04 | MC |
| SRR6502107 | root | control | 2.31 | MC |
| SRR6502108 | root | control | 3.54 | MC |
| SRR2154086 | seedling | wt | 0.44 | MC |
| SRR2154083 | seedling | wt | 0.35 | MC |
| SRR2154087 | seedling | wt | 0.50 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.53 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.49 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.15 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.41 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.73 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.25 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.72 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.58 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.26 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.76 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.39 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.45 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.80 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.46 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.58 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.69 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.14 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.00 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.99 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.43 | MC |