| SRR3745126 | anther | wt | 1.42 | MC |
| SRR3745127 | anther | wt | 1.60 | MC |
| SRR5560727 | caryopsis | wild_type | 0.29 | MC |
| SRR5560728 | caryopsis | wild_type | 0.34 | MC |
| SRR5560729 | caryopsis | wild_type | 0.99 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.91 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.38 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.60 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.77 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.63 | MC |
| SRR2338866 | endosprem | control | 2.96 | MC |
| SRR2338867 | endosprem | control | 1.18 | MC |
| SRR2338868 | endosprem | high_temperature | 1.38 | MC |
| SRR2338869 | endosprem | high_temperature | 2.72 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.38 | MC |
| SRR1213691 | flower | wt | 0.96 | MC |
| SRR8240824 | leaf | wild_type | 0.33 | MC |
| SRR8240825 | leaf | wild_type | 0.36 | MC |
| SRR8240826 | leaf | wild_type | 0.26 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.48 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.62 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.42 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.31 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.40 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.46 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.35 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.50 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.37 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.46 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.83 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.83 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.79 | MC |
| SRR1761528 | leaf | drought | 0.84 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.65 | MC |
| SRR6417967 | leaf | H2O_control | 0.46 | MC |
| SRR6417969 | leaf | H2O_control | 0.91 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.26 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.61 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.43 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.56 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.77 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.62 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.25 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.44 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.45 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.32 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.32 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.21 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.17 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.15 | MC |
| SRR1213692 | leaf | wt | 0.90 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.37 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.50 | MC |
| SRR6502088 | leaf | control | 0.30 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.43 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6168973 | leaf | none (control) | 0.53 | MC |
| SRR6168974 | leaf | none (control) | 1.19 | MC |
| SRR6168975 | leaf | none (control) | 3.05 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.29 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.36 | MC |
| SRR6168979 | leaf | none (control) | 0.43 | MC |
| SRR6168980 | leaf | none (control) | 0.20 | MC |
| SRR6168981 | leaf | none (control) | 0.52 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.26 | MC |
| SRR8582888 | panicle | AM | 2.78 | MC |
| SRR8582889 | panicle | AM | 1.18 | MC |
| SRR8582890 | panicle | AM | 1.09 | MC |
| SRR8582891 | panicle | PM | 0.96 | MC |
| SRR8582893 | panicle | PM | 0.52 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.70 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.28 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.47 | MC |
| SRR5126147 | root | "mock,1_day" | 1.39 | MC |
| SRR5126148 | root | "mock,1_day" | 0.94 | MC |
| SRR5126149 | root | "mock,1_day" | 0.42 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.36 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.75 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.54 | MC |
| SRR5126153 | root | "mock,7_days" | 0.32 | MC |
| SRR5126155 | root | "mock,7_days" | 0.54 | MC |
| SRR5126157 | root | "mock,7_days" | 0.67 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.43 | MC |
| SRR5126167 | root | "mock,14_days" | 0.32 | MC |
| SRR5126169 | root | "mock,14_days" | 0.48 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.51 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.52 | MC |
| SRR1213695 | root | wt | 0.74 | MC |
| SRR4947488 | root | control | 0.81 | MC |
| SRR4947501 | root | Al | 0.49 | MC |
| SRR4947508 | root | Al | 0.65 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.37 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.30 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.43 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.24 | MC |
| SRR6441555 | seedling | wild_type | 0.56 | MC |
| SRR2154086 | seedling | wt | 0.84 | MC |
| SRR2154085 | seedling | wt | 0.52 | MC |
| SRR2154087 | seedling | wt | 0.68 | MC |
| SRR3098741 | seedling | wt | 0.58 | MC |
| SRR3098742 | seedling | wt | 0.60 | MC |
| SRR3098743 | seedling | wt | 0.68 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.37 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.45 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.30 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.79 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.35 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.65 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.47 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.58 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.35 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.61 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.45 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.42 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.14 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.37 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.50 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.60 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.83 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.09 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.64 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.75 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.49 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.52 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.45 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.45 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.59 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.48 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.92 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.84 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.73 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.67 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.89 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.65 | MC |