| SRR5560727 | caryopsis | wild_type | 0.23 | MC |
| SRR5560728 | caryopsis | wild_type | 1.02 | MC |
| SRR5560729 | caryopsis | wild_type | 0.94 | MC |
| SRR7265407 | coleoptile | 3dA | 0.23 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.55 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.58 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.21 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.80 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.78 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.12 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.47 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.52 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.40 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.94 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.77 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.38 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR1213692 | leaf | wt | 1.92 | MC |
| SRR1213693 | leaf | wt | 2.42 | MC |
| SRR5856927 | leaf | control | 0.59 | MC |
| SRR5856932 | leaf | salt | 0.18 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.74 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.43 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.49 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.05 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.59 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.02 | MC |
| SRR5110446 | panicle | Dusk | 0.46 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.43 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.36 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.32 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.63 | MC |
| SRR5126149 | root | "mock,1_day" | 1.00 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126153 | root | "mock,7_days" | 0.86 | MC |
| SRR5126155 | root | "mock,7_days" | 1.55 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.02 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.90 | MC |
| SRR5126165 | root | "mock,14_days" | 0.34 | MC |
| SRR5126167 | root | "mock,14_days" | 0.45 | MC |
| SRR5126169 | root | "mock,14_days" | 0.55 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.33 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.83 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.45 | MC |
| SRR1213695 | root | wt | 2.11 | MC |
| SRR4947482 | root | Al | 0.92 | MC |
| SRR4947490 | root | Al | 2.20 | MC |
| SRR4947491 | root | Al | 1.61 | MC |
| SRR4947492 | root | Al | 0.78 | MC |
| SRR4947494 | root | control | 2.25 | MC |
| SRR4947499 | root | Al | 0.54 | MC |
| SRR4947503 | root | control | 1.12 | MC |
| SRR4947506 | root | Al | 1.05 | MC |
| SRR4947509 | root | Al | 1.35 | MC |
| SRR6502096 | root | control | 1.59 | MC |
| SRR6502108 | root | control | 1.20 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.83 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.27 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.47 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.52 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.34 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.64 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.61 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.12 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.10 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.03 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.98 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.99 | MC |