| SRR4457252 | 2nd_leaf | DAH12 | 0.25 | MC |
| SRR5560728 | caryopsis | wild_type | 0.37 | MC |
| SRR5560729 | caryopsis | wild_type | 0.33 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.66 | MC |
| SRR2338868 | endosprem | high_temperature | 0.68 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.24 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.31 | MC |
| SRR8060836 | leaf | wild_type | 0.45 | MC |
| SRR8240826 | leaf | wild_type | 1.28 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.20 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.31 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.48 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.48 | MC |
| SRR1761528 | leaf | drought | 0.48 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.68 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.45 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.30 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.22 | MC |
| SRR1213692 | leaf | wt | 0.43 | MC |
| SRR5856927 | leaf | control | 0.67 | MC |
| SRR5856929 | leaf | control | 0.41 | MC |
| SRR5856932 | leaf | salt | 0.30 | MC |
| SRR5856933 | leaf | control | 0.42 | MC |
| SRR5856934 | leaf | control | 0.40 | MC |
| SRR5856935 | leaf | control | 0.48 | MC |
| SRR5856937 | leaf | salt | 0.25 | MC |
| SRR5856938 | leaf | salt | 0.21 | MC |
| SRR6168974 | leaf | none (control) | 0.50 | MC |
| SRR6168979 | leaf | none (control) | 0.22 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.46 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.59 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.61 | MC |
| SRR5126147 | root | "mock,1_day" | 1.51 | MC |
| SRR5126148 | root | "mock,1_day" | 1.59 | MC |
| SRR5126149 | root | "mock,1_day" | 2.15 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.07 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.25 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.67 | MC |
| SRR5126155 | root | "mock,7_days" | 0.52 | MC |
| SRR5126157 | root | "mock,7_days" | 1.04 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.81 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.87 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.48 | MC |
| SRR5126165 | root | "mock,14_days" | 1.44 | MC |
| SRR5126167 | root | "mock,14_days" | 1.20 | MC |
| SRR5126169 | root | "mock,14_days" | 0.61 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.14 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.79 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.58 | MC |
| SRR1213694 | root | wt | 0.55 | MC |
| SRR1213695 | root | wt | 0.17 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502094 | root | control | 1.72 | MC |
| SRR6502095 | root | control | 1.07 | MC |
| SRR6502096 | root | control | 1.07 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.11 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.28 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.33 | MC |
| SRR6502106 | root | control | 1.31 | MC |
| SRR6502107 | root | control | 2.86 | MC |
| SRR6502108 | root | control | 1.72 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.61 | MC |
| SRR2154087 | seedling | wt | 0.36 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.15 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.77 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.04 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.14 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.02 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.35 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.27 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.73 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.35 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.71 | MC |