| SRR4457249 | 2nd_leaf | DAH4 | 1.14 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.43 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.24 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.89 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.26 | MC |
| SRR3745125 | anther | wt | 5.41 | MC |
| SRR6320498 | carpel | wt | 4.06 | MC |
| SRR5560727 | caryopsis | wild_type | 4.49 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.44 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.91 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.70 | MC |
| SRR7265376 | embryo | 1hA | 2.88 | MC |
| SRR7265379 | embryo | 1hN | 1.82 | MC |
| SRR7265381 | embryo | 1hN | 2.38 | MC |
| SRR2338867 | endosprem | control | 1.34 | MC |
| SRR2338868 | endosprem | high_temperature | 0.60 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.28 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.11 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.13 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.18 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.29 | MC |
| SRR8240824 | leaf | wild_type | 0.58 | MC |
| SRR8240818 | leaf | wild_type | 1.73 | MC |
| SRR8240819 | leaf | wild_type | 1.10 | MC |
| SRR8240820 | leaf | wild_type | 2.27 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.69 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.29 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.39 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.45 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.13 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.04 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.06 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.23 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.21 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.17 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.14 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.95 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.90 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.10 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.73 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.83 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.95 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.48 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.29 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.10 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.35 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.70 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.37 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.58 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.86 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.93 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.16 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.19 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.80 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.35 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.54 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.08 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.03 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.03 | MC |
| SRR1761531 | leaf | control | 1.03 | MC |
| SRR504365 | leaf | wt | 1.81 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.82 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.71 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.08 | MC |
| SRR6417968 | leaf | H2O_control | 1.62 | MC |
| SRR6417969 | leaf | H2O_control | 0.65 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.98 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.54 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.58 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.90 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.59 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.59 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.41 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR1213692 | leaf | wt | 3.23 | MC |
| SRR1213693 | leaf | wt | 2.53 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.74 | MC |
| SRR6502088 | leaf | control | 3.37 | MC |
| SRR6502090 | leaf | control | 0.64 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.00 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.33 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.59 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.37 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 5.48 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.62 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.00 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.89 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 5.19 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 6.47 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.02 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.24 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 5.46 | MC |
| SRR6168980 | leaf | none (control) | 0.40 | MC |
| SRR6168981 | leaf | none (control) | 0.76 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.98 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.95 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.72 | MC |
| SRR8582889 | panicle | AM | 0.31 | MC |
| SRR8582890 | panicle | AM | 0.47 | MC |
| SRR8582891 | panicle | PM | 1.56 | MC |
| SRR8582892 | panicle | PM | 1.66 | MC |
| SRR5110440 | panicle | Dawn + 7h | 5.47 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.80 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.37 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.97 | MC |
| SRR5126148 | root | "mock,1_day" | 0.88 | MC |
| SRR5126149 | root | "mock,1_day" | 3.28 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.66 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.58 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.74 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.21 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.35 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.56 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.22 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.32 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.99 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.54 | MC |
| SRR6441554 | seedling | wild_type | 1.29 | MC |
| SRR6441555 | seedling | wild_type | 1.77 | MC |
| SRR3098743 | seedling | wt | 1.65 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.80 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.11 | MC |
| SRR358794 | seedling | wt | 6.15 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.46 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.63 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.91 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.51 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.80 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.79 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.89 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.97 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.21 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.98 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.07 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.95 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.26 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.48 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.95 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.56 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.26 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.91 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.94 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.89 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.81 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.58 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.10 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.67 | MC |