| SRR4457249 | 2nd_leaf | DAH4 | 5.01 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.49 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 4.27 | MC |
| SRR3745125 | anther | wt | 3.53 | MC |
| SRR3745126 | anther | wt | 2.42 | MC |
| SRR3745127 | anther | wt | 2.99 | MC |
| SRR358795 | callus | wt | 8.00 | MC |
| SRR358796 | callus | wt | 8.13 | MC |
| SRR358797 | callus | wt | 7.99 | MC |
| SRR358798 | callus | wt | 8.31 | MC |
| SRR6320473 | carpel | wt | 5.17 | MC |
| SRR6320498 | carpel | wt | 4.45 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.76 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.17 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.24 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.88 | MC |
| SRR7265400 | coleoptile | 2dA | 3.25 | MC |
| SRR7265401 | coleoptile | 2dA | 2.81 | MC |
| SRR7265402 | coleoptile | 2dA | 2.91 | MC |
| SRR7265406 | coleoptile | 3dA | 1.72 | MC |
| SRR7265407 | coleoptile | 3dA | 1.65 | MC |
| SRR7265408 | coleoptile | 3dA | 1.28 | MC |
| SRR7265409 | coleoptile | 3dN | 1.84 | MC |
| SRR7265410 | coleoptile | 3dN | 3.04 | MC |
| SRR7265411 | coleoptile | 3dN | 2.77 | MC |
| SRR7265412 | coleoptile | 4dA | 2.10 | MC |
| SRR7265413 | coleoptile | 4dA | 4.08 | MC |
| SRR7265414 | coleoptile | 4dA | 3.06 | MC |
| SRR7265415 | coleoptile | 4dN | 2.85 | MC |
| SRR7265416 | coleoptile | 4dN | 2.43 | MC |
| SRR7265417 | coleoptile | 4dN | 2.72 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.31 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.77 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.81 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.01 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.25 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.43 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.79 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.20 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.90 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.24 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.59 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.78 | MC |
| SRR7265388 | embryo | 12hA | 4.52 | MC |
| SRR7265389 | embryo | 12hA | 4.64 | MC |
| SRR7265390 | embryo | 12hA | 4.20 | MC |
| SRR7265394 | embryo | 24hA | 3.22 | MC |
| SRR7265395 | embryo | 24hA | 4.20 | MC |
| SRR7265396 | embryo | 24hA | 3.87 | MC |
| SRR2338866 | endosprem | control | 3.25 | MC |
| SRR2338867 | endosprem | control | 1.75 | MC |
| SRR976168 | flag_leaf | wild_type | 2.34 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.98 | MC |
| SRR8240819 | leaf | wild_type | 2.29 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.83 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.40 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.63 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.76 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.02 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.73 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.67 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.26 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.71 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.72 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.31 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.17 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.15 | MC |
| SRR1761528 | leaf | drought | 5.17 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.39 | MC |
| SRR6502088 | leaf | control | 3.50 | MC |
| SRR6502089 | leaf | control | 4.02 | MC |
| SRR6502090 | leaf | control | 3.39 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.68 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.10 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.82 | MC |
| SRR6502100 | leaf | control | 3.25 | MC |
| SRR6502101 | leaf | control | 2.47 | MC |
| SRR6502102 | leaf | control | 2.46 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.76 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.29 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.27 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 6.63 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.02 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 5.97 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.48 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.59 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.74 | MC |
| SRR6168973 | leaf | none (control) | 2.93 | MC |
| SRR6168974 | leaf | none (control) | 3.63 | MC |
| SRR6168975 | leaf | none (control) | 4.11 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.67 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.23 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.07 | MC |
| SRR6168980 | leaf | none (control) | 1.64 | MC |
| SRR6168981 | leaf | none (control) | 2.34 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.24 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.17 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.47 | MC |
| SRR8582891 | panicle | PM | 4.20 | MC |
| SRR8582892 | panicle | PM | 5.16 | MC |
| SRR5110429 | panicle | Dawn | 4.22 | MC |
| SRR5110430 | panicle | Dawn | 3.31 | MC |
| SRR5110431 | panicle | Dawn | 3.26 | MC |
| SRR5110432 | panicle | Dawn | 3.48 | MC |
| SRR4947496 | root | control | 4.56 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.84 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.90 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.01 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.46 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.70 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.92 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.77 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.76 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.94 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.45 | MC |
| SRR5110450 | panicle | Dawn + 14h | 4.54 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.54 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.30 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.72 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.42 | MC |
| SRR5110459 | panicle | Dawn + 21h | 4.03 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.97 | MC |
| SRR1633182 | panicle | WT | 5.00 | MC |
| SRR4947478 | root | control | 4.43 | MC |
| SRR4947479 | root | control | 4.11 | MC |
| SRR4947480 | root | control | 4.85 | MC |
| SRR4947481 | root | control | 5.14 | MC |
| SRR4947483 | root | Al | 3.92 | MC |
| SRR4947484 | root | Al | 3.98 | MC |
| SRR4947485 | root | Al | 3.92 | MC |
| SRR4947488 | root | control | 4.60 | MC |
| SRR4947489 | root | control | 4.01 | MC |
| SRR4947492 | root | Al | 4.83 | MC |
| SRR4947493 | root | Al | 4.49 | MC |
| SRR4947497 | root | control | 5.79 | MC |
| SRR4947499 | root | Al | 4.74 | MC |
| SRR4947503 | root | control | 4.46 | MC |
| SRR4947506 | root | Al | 4.09 | MC |
| SRR4947508 | root | Al | 5.04 | MC |
| SRR4947509 | root | Al | 4.25 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.72 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.33 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.35 | MC |
| SRR2154083 | seedling | wt | 3.08 | MC |
| SRR3098743 | seedling | wt | 2.43 | MC |
| SRR1944583 | seedling | no_treatment | 2.97 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.79 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.33 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.91 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.09 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.76 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.00 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.88 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.37 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.43 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.42 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.27 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.91 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.97 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.96 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.84 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.67 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.40 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.70 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 13.49 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.28 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 6.52 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.84 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.75 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.49 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.62 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.56 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.94 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.34 | MC |